Gene name: ERD1
Reference locus (S288C): YDR414C
Gene biotype: protein_coding
Description: Protein ERD1; Predicted membrane protein required for lumenal ER protein retention; mutants secrete the endogenous ER protein, BiP (Kar2p)
Top 10 interactors (score): MEH1 (0.964); ERS1 (0.96); ERD2 (0.912); YPL264C (0.877); SVF1 (0.792); MNN9 (0.715); YHL042W (0.713); YCL049C (0.692); MNN10 (0.685); ERV25 (0.662); CNE1 (0.649); PMP2 (0.648); LRG1 (0.642); YHR078W (0.64); SCJ1 (0.621); PMT1 (0.605); YPS5 (0.594); EOS1 (0.59); STE24 (0.588); YIP3 (0.588)
Homologues (species, bitscore): XPR1 (Homo sapiens, 62.8); Xpr1 (Mus musculus, 63.5); xpr1a (Danio rerio, 60.5); xpr1 (Xenopus tropicalis, 66.6); CG7536 (Drosophila melanogaster, 62.4); Y39A1A.22 (Caenorhabditis elegans, 67.4); AT1G69480 (Arabidopsis thaliana, 62.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1235751-1236839:- | gene-YDR414C_AKU4011 | rna-NM_001180722.4_AKU4011 | cds-NP_010702.4_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000039.1:114234-115322:- | gene-YDR414C_BG1 | rna-NM_001180722.4_BG1 | cds-NP_010702.4_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1266632-1267720:- | gene-YDR414C_Bruggeman | rna-NM_001180722.4_Bruggeman | cds-NP_010702.4_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1245192-1246280:- | gene-YDR414C_CAT1 | rna-NM_001180722.4_CAT1 | cds-NP_010702.4_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1230671-1231759:- | gene-YDR414C_CBS1585 | rna-NM_001180722.4_CBS1585 | cds-NP_010702.4_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1249530-1250618:- | gene-YDR414C_CBS436 | rna-NM_001180722.4_CBS436 | cds-NP_010702.4_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1226725-1227813:- | gene-YDR414C_CBS6412 | rna-NM_001180722.4_CBS6412 | cds-NP_010702.4_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1248580-1249668:- | gene-YDR414C_CBS6413 | rna-NM_001180722.4_CBS6413 | cds-NP_010702.4_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1294257-1295345:- | gene-YDR414C_CENPK1137D | rna-NM_001180722.4_CENPK1137D | cds-NP_010702.4_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:1240139-1241227:- | gene-YDR414C_EthanolRed | rna-NM_001180722.4_EthanolRed | cds-NP_010702.4_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1243446-1244534:- | gene-YDR414C_FaliES1 | rna-NM_001180722.4_FaliES1 | cds-NP_010702.4_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000181.1:10979-12067:+ | gene-YDR414C_JAY291 | rna-NM_001180722.4_JAY291 | cds-NP_010702.4_JAY291 | 100.0 | 100.0 | Verified | 2 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000445.1:72-1160:+ | gene-YDR414C_1_JAY291 | Unknown | Unknown | 100.0 | 100.0 | Verified | 2 | 2 | 1 | Unknown | Unknown | Unknown | Unknown | Unknown |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1250194-1251282:- | gene-YDR414C_MUCL30387 | rna-NM_001180722.4_MUCL30387 | cds-NP_010702.4_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1232300-1233388:- | gene-YDR414C_MUCL30388 | rna-NM_001180722.4_MUCL30388 | cds-NP_010702.4_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1221999-1223087:- | gene-YDR414C_MUCL39482 | rna-NM_001180722.4_MUCL39482 | cds-NP_010702.4_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:1164430-1165518:- | gene-YDR414C_MUCL42920 | rna-NM_001180722.4_MUCL42920 | cds-NP_010702.4_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1295521-1296609:- | gene-YDR414C_NCIM3186 | rna-NM_001180722.4_NCIM3186 | cds-NP_010702.4_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1235971-1237059:- | gene-YDR414C_NCYC1407 | rna-NM_001180722.4_NCYC1407 | cds-NP_010702.4_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1246103-1247191:- | gene-YDR414C_PE2H3 | rna-NM_001180722.4_PE2H3 | cds-NP_010702.4_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1251671-1252759:- | gene-YDR414C_PE2H4 | rna-NM_001180722.4_PE2H4 | cds-NP_010702.4_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1295598-1296686:- | gene-YDR414C_S288C | rna-NM_001180722.4_S288C | cds-NP_010702.4_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000071.1:11101-12189:+ | gene-YDR414C_SA1 | rna-NM_001180722.4_SA1 | cds-NP_010702.4_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1247708-1248796:- | gene-YDR414C_ThermosaccDry | rna-NM_001180722.4_ThermosaccDry | cds-NP_010702.4_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1262910-1263998:- | gene-YDR414C_VR1 | rna-NM_001180722.4_VR1 | cds-NP_010702.4_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:290520-291608:- | gene-YDR414C_ZTW1 | rna-NM_001180722.4_ZTW1 | cds-NP_010702.4_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1242929-1244017:- | gene-YDR414C_Sparadoxus | rna-NM_001180722.4_Sparadoxus | cds-NP_010702.4_Sparadoxus | 87.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |