Gene name: EMW1
Reference locus (S288C): YNL313C
Gene biotype: protein_coding
Description: Essential for maintenance of the cell wall protein 1; Essential conserved protein with a role in cell wall integrity; contains six TPR (tetratricopeptide repeat) domains clustered in the C-terminal region; conditional mutant is suppressed by overexpression of GFA1; protein abundance increases in response to DNA replication stress; Belongs to the TTC27 family
Top 10 interactors (score): KRE33 (0.989); PWP1 (0.987); UTP18 (0.984); NOP2 (0.972); DBP7 (0.971); PWP2 (0.967); UTP13 (0.963); KRI1 (0.962); INO1 (0.962); FAR8 (0.962); DLD2 (0.962); RPA135 (0.96); DIP2 (0.959); UTP10 (0.948); MTR4 (0.943); HCA4 (0.938); UTP21 (0.936); RRP12 (0.936); ERB1 (0.922); MRD1 (0.92)
Homologues (species, bitscore): TTC27 (Homo sapiens, 185.7); Ttc27 (Mus musculus, 184.5); ttc27 (Danio rerio, 189.9); ttc27 (Xenopus tropicalis, 148.7); CG5290 (Drosophila melanogaster, 143.7); T20B12.1 (Caenorhabditis elegans, 119.8); AT5G17270 (Arabidopsis thaliana, 110.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:39110-41824:- | gene-YNL313C_AKU4011 | rna-NM_001183151.1_AKU4011 | cds-NP_014086.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000074.1:48817-51531:+ | gene-YNL313C_BG1 | rna-NM_001183151.1_BG1 | cds-NP_014086.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:48449-51163:- | gene-YNL313C_Bruggeman | rna-NM_001183151.1_Bruggeman | cds-NP_014086.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:51064-53778:- | gene-YNL313C_CAT1 | rna-NM_001183151.1_CAT1 | cds-NP_014086.1_CAT1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:39442-42156:- | gene-YNL313C_CBS1585 | rna-NM_001183151.1_CBS1585 | cds-NP_014086.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:39934-42648:- | gene-YNL313C_CBS436 | rna-NM_001183151.1_CBS436 | cds-NP_014086.1_CBS436 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:36101-38815:- | gene-YNL313C_CBS6412 | rna-NM_001183151.1_CBS6412 | cds-NP_014086.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:36290-39004:- | gene-YNL313C_CBS6413 | rna-NM_001183151.1_CBS6413 | cds-NP_014086.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:39135-41849:- | gene-YNL313C_CENPK1137D | rna-NM_001183151.1_CENPK1137D | cds-NP_014086.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:36132-38846:- | gene-YNL313C_EthanolRed | rna-NM_001183151.1_EthanolRed | cds-NP_014086.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:37031-39745:- | gene-YNL313C_FaliES1 | rna-NM_001183151.1_FaliES1 | cds-NP_014086.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000390.1:15772-18486:+ | gene-YNL313C_JAY291 | rna-NM_001183151.1_JAY291 | cds-NP_014086.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:48704-51418:- | gene-YNL313C_MUCL30387 | rna-NM_001183151.1_MUCL30387 | cds-NP_014086.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:41735-44449:- | gene-YNL313C_MUCL30388 | rna-NM_001183151.1_MUCL30388 | cds-NP_014086.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:37078-39792:- | gene-YNL313C_MUCL39482 | rna-NM_001183151.1_MUCL39482 | cds-NP_014086.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:38770-41484:- | gene-YNL313C_MUCL42920 | rna-NM_001183151.1_MUCL42920 | cds-NP_014086.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:45277-47991:- | gene-YNL313C_NCIM3186 | rna-NM_001183151.1_NCIM3186 | cds-NP_014086.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:38410-41124:- | gene-YNL313C_NCYC1407 | rna-NM_001183151.1_NCYC1407 | cds-NP_014086.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:35612-38326:- | gene-YNL313C_PE2H3 | rna-NM_001183151.1_PE2H3 | cds-NP_014086.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:35000-37714:- | gene-YNL313C_PE2H4 | rna-NM_001183151.1_PE2H4 | cds-NP_014086.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:45308-48022:- | gene-YNL313C_S288C | rna-NM_001183151.1_S288C | cds-NP_014086.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000052.1:49202-51916:+ | gene-YNL313C_SA1 | rna-NM_001183151.1_SA1 | cds-NP_014086.1_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:37888-40602:- | gene-YNL313C_ThermosaccDry | rna-NM_001183151.1_ThermosaccDry | cds-NP_014086.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:50427-53141:- | gene-YNL313C_VR1 | rna-NM_001183151.1_VR1 | cds-NP_014086.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000029.1:29101-31815:- | gene-YNL313C_ZTW1 | rna-NM_001183151.1_ZTW1 | cds-NP_014086.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:47087-49801:- | gene-YNL313C_Sparadoxus | rna-NM_001183151.1_Sparadoxus | cds-NP_014086.1_Sparadoxus | 89.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |