EMT5 (YNCJ0016C)

Gene profile

Gene name: EMT5
Reference locus (S288C): YNCJ0016C
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005304.1:374001-374073:- gene-YNCJ0016C_AKU4011 rna-YNCJ0016C_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000190.1:240011-240083:+ gene-YNCJ0016C_BG1 rna-YNCJ0016C_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005512.1:388196-388268:- gene-YNCJ0016C_Bruggeman rna-YNCJ0016C_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005528.1:392151-392223:- gene-YNCJ0016C_CAT1 rna-YNCJ0016C_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005368.1:385667-385739:- gene-YNCJ0016C_CBS1585 rna-YNCJ0016C_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005352.1:404023-404095:- gene-YNCJ0016C_CBS436 rna-YNCJ0016C_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005336.1:374263-374335:- gene-YNCJ0016C_CBS6412 rna-YNCJ0016C_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005320.1:376143-376215:- gene-YNCJ0016C_CBS6413 rna-YNCJ0016C_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001531.1:373469-373541:- gene-YNCJ0016C_CENPK1137D rna-YNCJ0016C_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005480.1:377219-377291:- gene-YNCJ0016C_EthanolRed rna-YNCJ0016C_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005544.1:389666-389738:- gene-YNCJ0016C_FaliES1 rna-YNCJ0016C_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000200.1:25692-25764:+ gene-YNCJ0016C_JAY291 rna-YNCJ0016C_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005416.1:388437-388509:- gene-YNCJ0016C_MUCL30387 rna-YNCJ0016C_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005448.1:384581-384653:- gene-YNCJ0016C_MUCL30388 rna-YNCJ0016C_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005288.1:378991-379063:- gene-YNCJ0016C_MUCL39482 rna-YNCJ0016C_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005432.1:384325-384397:- gene-YNCJ0016C_MUCL42920 rna-YNCJ0016C_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011819.1:391022-391094:- gene-YNCJ0016C_NCIM3186 rna-YNCJ0016C_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005272.1:376938-377010:- gene-YNCJ0016C_NCYC1407 rna-YNCJ0016C_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994149.1:389013-389085:- gene-YNCJ0016C_PE2H3 rna-YNCJ0016C_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999881.1:388659-388731:- gene-YNCJ0016C_PE2H4 rna-YNCJ0016C_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001142.9:391043-391115:- gene-YNCJ0016C_S288C rna-YNCJ0016C_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000003.1:186543-186615:- gene-YNCJ0016C_SA1 rna-YNCJ0016C_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005496.1:383327-383399:- gene-YNCJ0016C_ThermosaccDry rna-YNCJ0016C_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005464.1:385170-385242:- gene-YNCJ0016C_VR1 rna-YNCJ0016C_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000021.1:363992-364064:- gene-YNCJ0016C_ZTW1 rna-YNCJ0016C_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047496.1:389222-389294:- gene-YNCJ0016C_Sparadoxus rna-YNCJ0016C_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files