EMT1 (YNCD0025W)

Gene profile

Gene name: EMT1
Reference locus (S288C): YNCD0025W
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005298.1:1121893-1121965:+ gene-YNCD0025W_AKU4011 rna-YNCD0025W_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000039.1:440-512:+ gene-YNCD0025W_BG1 rna-YNCD0025W_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005517.1:948178-948250:+ gene-YNCD0025W_1_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 3 2 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable MBVY01000129.1:325-397:+ gene-YNCD0025W_2_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 3 3 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005506.1:1152547-1152619:+ gene-YNCD0025W_Bruggeman rna-YNCD0025W_Bruggeman Unknown 100.0 100.0 Unannotated 3 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005533.1:947112-947184:+ gene-YNCD0025W_1_CAT1 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005522.1:1131134-1131206:+ gene-YNCD0025W_CAT1 rna-YNCD0025W_CAT1 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005362.1:1116610-1116682:+ gene-YNCD0025W_CBS1585 rna-YNCD0025W_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005346.1:1135192-1135264:+ gene-YNCD0025W_CBS436 rna-YNCD0025W_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005330.1:1112871-1112943:+ gene-YNCD0025W_CBS6412 rna-YNCD0025W_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005314.1:1134761-1134833:+ gene-YNCD0025W_CBS6413 rna-YNCD0025W_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001525.1:1174476-1174548:+ gene-YNCD0025W_CENPK1137D rna-YNCD0025W_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005474.1:1126296-1126368:+ gene-YNCD0025W_EthanolRed rna-YNCD0025W_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005538.1:1129579-1129651:+ gene-YNCD0025W_FaliES1 rna-YNCD0025W_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000057.1:61422-61487:- gene-YNCD0025W_JAY291 rna-YNCD0025W_JAY291 Unknown 90.4 90.4 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005410.1:1135845-1135917:+ gene-YNCD0025W_MUCL30387 rna-YNCD0025W_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005442.1:1118454-1118526:+ gene-YNCD0025W_MUCL30388 rna-YNCD0025W_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005282.1:1108144-1108216:+ gene-YNCD0025W_MUCL39482 rna-YNCD0025W_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005435.1:552532-552604:- gene-YNCD0025W_2_MUCL42920 Unknown Unknown 100.0 100.0 Unannotated 3 3 0 Unknown Unknown non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005437.1:961488-961560:+ gene-YNCD0025W_1_MUCL42920 Unknown Unknown 100.0 100.0 Unannotated 3 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005426.1:1050079-1050151:+ gene-YNCD0025W_MUCL42920 rna-YNCD0025W_MUCL42920 Unknown 100.0 100.0 Unannotated 3 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011813.1:1175752-1175824:+ gene-YNCD0025W_NCIM3186 rna-YNCD0025W_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005266.1:1121818-1121890:+ gene-YNCD0025W_NCYC1407 rna-YNCD0025W_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994143.1:1132243-1132315:+ gene-YNCD0025W_PE2H3 rna-YNCD0025W_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999875.1:1137828-1137900:+ gene-YNCD0025W_PE2H4 rna-YNCD0025W_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001136.10:1175829-1175901:+ gene-YNCD0025W_S288C rna-YNCD0025W_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000016.1:81208-81280:+ gene-YNCD0025W_SA1 rna-YNCD0025W_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005490.1:1133860-1133932:+ gene-YNCD0025W_ThermosaccDry rna-YNCD0025W_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005469.1:1004951-1005023:+ gene-YNCD0025W_VR1 rna-YNCD0025W_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000008.1:176701-176773:+ gene-YNCD0025W_ZTW1 rna-YNCD0025W_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047490.1:1127781-1127853:+ gene-YNCD0025W_Sparadoxus rna-YNCD0025W_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files