Gene name: EMP70
Reference locus (S288C): YLR083C
Gene biotype: protein_coding
Description: Transmembrane 9 superfamily member 1; Protein with a role in cellular adhesion and filamentous growth; also endosome-to-vacuole sorting; similar to Tmn3p; member of Transmembrane Nine family of proteins with 9 transmembrane segments; EMP70 has a paralog, TMN2, that arose from the whole genome duplication
Top 10 interactors (score): SRL2 (0.745); RAX2 (0.718); NUC1 (0.716); GUA1 (0.703); VFA1 (0.694); MES1 (0.665); RLI1 (0.65); VAB2 (0.613); EIS1 (0.61); RCR1 (0.61); PMT4 (0.61); BSC6 (0.594); EMP46 (0.574); PFA3 (0.567); YIP5 (0.545); NOP1 (0.522); ERV25 (0.514); URA7 (0.508); GYP5 (0.504); CIN10 (0.482)
Homologues (species, bitscore): TM9SF4 (Homo sapiens, 428.7); Tm9sf4 (Mus musculus, 421.0); tm9sf2 (Danio rerio, 428.3); ENSXETP00000007529 (Xenopus tropicalis, 418.7); TM9SF4 (Drosophila melanogaster, 419.1); tag-123 (Caenorhabditis elegans, 427.2); TMN6 (Arabidopsis thaliana, 445.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:276564-278567:- | gene-YLR083C_AKU4011 | rna-NM_001181970.1_AKU4011 | cds-NP_013184.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000212.1:239733-241736:- | gene-YLR083C_BG1 | rna-NM_001181970.1_BG1 | cds-NP_013184.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:286471-288474:- | gene-YLR083C_Bruggeman | rna-NM_001181970.1_Bruggeman | cds-NP_013184.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:286791-288794:- | gene-YLR083C_CAT1 | rna-NM_001181970.1_CAT1 | cds-NP_013184.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:283678-285681:- | gene-YLR083C_CBS1585 | rna-NM_001181970.1_CBS1585 | cds-NP_013184.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:274301-276304:- | gene-YLR083C_CBS436 | rna-NM_001181970.1_CBS436 | cds-NP_013184.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:282119-284122:- | gene-YLR083C_CBS6412 | rna-NM_001181970.1_CBS6412 | cds-NP_013184.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:283950-285953:- | gene-YLR083C_CBS6413 | rna-NM_001181970.1_CBS6413 | cds-NP_013184.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:279102-281105:- | gene-YLR083C_CENPK1137D | rna-NM_001181970.1_CENPK1137D | cds-NP_013184.1_CENPK1137D | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:276083-278086:- | gene-YLR083C_EthanolRed | rna-NM_001181970.1_EthanolRed | cds-NP_013184.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:275959-277962:- | gene-YLR083C_FaliES1 | rna-NM_001181970.1_FaliES1 | cds-NP_013184.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000129.1:50894-52897:- | gene-YLR083C_JAY291 | rna-NM_001181970.1_JAY291 | cds-NP_013184.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:283836-285839:- | gene-YLR083C_MUCL30387 | rna-NM_001181970.1_MUCL30387 | cds-NP_013184.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:291484-293487:- | gene-YLR083C_MUCL30388 | rna-NM_001181970.1_MUCL30388 | cds-NP_013184.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:284196-286199:- | gene-YLR083C_MUCL39482 | rna-NM_001181970.1_MUCL39482 | cds-NP_013184.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:284118-286121:- | gene-YLR083C_MUCL42920 | rna-NM_001181970.1_MUCL42920 | cds-NP_013184.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:294065-296068:- | gene-YLR083C_NCIM3186 | rna-NM_001181970.1_NCIM3186 | cds-NP_013184.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:276267-278270:- | gene-YLR083C_NCYC1407 | rna-NM_001181970.1_NCYC1407 | cds-NP_013184.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:282127-284130:- | gene-YLR083C_PE2H3 | rna-NM_001181970.1_PE2H3 | cds-NP_013184.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:281868-283871:- | gene-YLR083C_PE2H4 | rna-NM_001181970.1_PE2H4 | cds-NP_013184.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:294091-296094:- | gene-YLR083C_S288C | rna-NM_001181970.1_S288C | cds-NP_013184.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000033.1:78023-80026:+ | gene-YLR083C_SA1 | rna-NM_001181970.1_SA1 | cds-NP_013184.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:276135-278138:- | gene-YLR083C_ThermosaccDry | rna-NM_001181970.1_ThermosaccDry | cds-NP_013184.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:290319-292322:- | gene-YLR083C_VR1 | rna-NM_001181970.1_VR1 | cds-NP_013184.1_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000023.1:275517-277520:- | gene-YLR083C_ZTW1 | rna-NM_001181970.1_ZTW1 | cds-NP_013184.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:284370-286372:- | gene-YLR083C_Sparadoxus | rna-NM_001181970.1_Sparadoxus | cds-NP_013184.1_Sparadoxus | 90.0 | 99.9 | Verified | 1 | 1 | 0 | False | False | True | False | False |