Gene name: EMC5
Reference locus (S288C): YIL027C
Gene biotype: protein_coding
Description: Member of conserved ER transmembrane complex; required for efficient folding of proteins in the ER; null mutant displays induction of the unfolded protein response, and also shows K1 killer toxin resistance; homologous to worm B0334.15/EMC-5, fly CG15168, human MMGT
Top 10 interactors (score): EMC3 (0.998); EMC1 (0.998); EMC2 (0.998); EMC6 (0.998); EMC4 (0.998); EMC10 (0.982); SOP4 (0.965); TOM5 (0.689); ILM1 (0.674); ICE2 (0.63); EMP65 (0.575); YOR1 (0.493); RPL15A (0.487); GPI18 (0.446); HRD3 (0.442); SPF1 (0.405); GET1 (0.403); PHO88 (0.402)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:302134-302559:- | gene-YIL027C_AKU4011 | rna-NM_001179377.1_AKU4011 | cds-NP_012237.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000164.1:161959-162384:- | gene-YIL027C_BG1 | rna-NM_001179377.1_BG1 | cds-NP_012237.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:307276-307701:- | gene-YIL027C_Bruggeman | rna-NM_001179377.1_Bruggeman | cds-NP_012237.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:294693-295118:- | gene-YIL027C_CAT1 | rna-NM_001179377.1_CAT1 | cds-NP_012237.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:302223-302648:- | gene-YIL027C_CBS1585 | rna-NM_001179377.1_CBS1585 | cds-NP_012237.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:295657-296082:- | gene-YIL027C_CBS436 | rna-NM_001179377.1_CBS436 | cds-NP_012237.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005335.1:297755-298180:- | gene-YIL027C_CBS6412 | rna-NM_001179377.1_CBS6412 | cds-NP_012237.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:294139-294564:- | gene-YIL027C_CBS6413 | rna-NM_001179377.1_CBS6413 | cds-NP_012237.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:295588-296013:- | gene-YIL027C_CENPK1137D | rna-NM_001179377.1_CENPK1137D | cds-NP_012237.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:285101-285526:- | gene-YIL027C_EthanolRed | rna-NM_001179377.1_EthanolRed | cds-NP_012237.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:303012-303437:- | gene-YIL027C_FaliES1 | rna-NM_001179377.1_FaliES1 | cds-NP_012237.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000098.1:13551-13976:+ | gene-YIL027C_JAY291 | rna-NM_001179377.1_JAY291 | cds-NP_012237.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:304126-304551:- | gene-YIL027C_MUCL30387 | rna-NM_001179377.1_MUCL30387 | cds-NP_012237.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:300231-300656:- | gene-YIL027C_MUCL30388 | rna-NM_001179377.1_MUCL30388 | cds-NP_012237.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:302814-303239:- | gene-YIL027C_MUCL39482 | rna-NM_001179377.1_MUCL39482 | cds-NP_012237.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:305942-306367:- | gene-YIL027C_MUCL42920 | rna-NM_001179377.1_MUCL42920 | cds-NP_012237.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:303679-304104:- | gene-YIL027C_NCIM3186 | rna-NM_001179377.1_NCIM3186 | cds-NP_012237.1_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:307087-307512:- | gene-YIL027C_NCYC1407 | rna-NM_001179377.1_NCYC1407 | cds-NP_012237.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:298728-299153:- | gene-YIL027C_PE2H3 | rna-NM_001179377.1_PE2H3 | cds-NP_012237.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:293434-293859:- | gene-YIL027C_PE2H4 | rna-NM_001179377.1_PE2H4 | cds-NP_012237.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:303679-304104:- | gene-YIL027C_S288C | rna-NM_001179377.1_S288C | cds-NP_012237.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000031.1:20430-20855:+ | gene-YIL027C_SA1 | rna-NM_001179377.1_SA1 | cds-NP_012237.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:301681-302106:- | gene-YIL027C_ThermosaccDry | rna-NM_001179377.1_ThermosaccDry | cds-NP_012237.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:298316-298741:- | gene-YIL027C_VR1 | rna-NM_001179377.1_VR1 | cds-NP_012237.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000019.1:276101-276526:- | gene-YIL027C_ZTW1 | rna-NM_001179377.1_ZTW1 | cds-NP_012237.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:296832-297257:- | gene-YIL027C_Sparadoxus | rna-NM_001179377.1_Sparadoxus | cds-NP_012237.1_Sparadoxus | 90.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |