Gene name: EMA35
Reference locus (S288C): YCR100C
Gene biotype: protein_coding
Description: Uncharacterized protein YCR100C; Putative protein of unknown function
Top 10 interactors (score): YCR099C (0.882); RNH202 (0.746); DIA2 (0.692); VPS35 (0.625); HPR1 (0.613); BEM2 (0.561); PEP8 (0.489); YPT7 (0.472); XRN1 (0.438); ISC1 (0.437); VPS29 (0.423); CHC1 (0.41)
Homologues (species, bitscore): SORL1 (Homo sapiens, 51.2); Sorl1 (Mus musculus, 50.8); sort1b (Danio rerio, 57.8); sort1 (Xenopus tropicalis, 53.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:297401-298350:- | gene-YCR100C_AKU4011 | rna-NM_001178807.1_AKU4011 | cds-NP_010024.1_AKU4011 | 98.4 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000081.1:3691-4640:+ | gene-YCR100C_BG1 | rna-NM_001178807.1_BG1 | cds-NP_010024.1_BG1 | 98.2 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:293748-294698:- | gene-YCR100C_Bruggeman | rna-NM_001178807.1_Bruggeman | cds-NP_010024.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:303460-304410:- | gene-YCR100C_CAT1 | rna-NM_001178807.1_CAT1 | cds-NP_010024.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:292504-293453:- | gene-YCR100C_CBS1585 | rna-NM_001178807.1_CBS1585 | cds-NP_010024.1_CBS1585 | 98.4 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:303580-304530:- | gene-YCR100C_CBS436 | rna-NM_001178807.1_CBS436 | cds-NP_010024.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:283085-284034:- | gene-YCR100C_CBS6412 | rna-NM_001178807.1_CBS6412 | cds-NP_010024.1_CBS6412 | 98.4 | 99.8 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:298037-298986:- | gene-YCR100C_CBS6413 | rna-NM_001178807.1_CBS6413 | cds-NP_010024.1_CBS6413 | 98.4 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:300464-301413:- | gene-YCR100C_CENPK1137D | rna-NM_001178807.1_CENPK1137D | cds-NP_010024.1_CENPK1137D | 99.2 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:292823-293772:- | gene-YCR100C_EthanolRed | rna-NM_001178807.1_EthanolRed | cds-NP_010024.1_EthanolRed | 98.2 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:299196-300145:- | gene-YCR100C_FaliES1 | rna-NM_001178807.1_FaliES1 | cds-NP_010024.1_FaliES1 | 98.2 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000259.1:6194-7143:- | gene-YCR100C_JAY291 | rna-NM_001178807.1_JAY291 | cds-NP_010024.1_JAY291 | 98.2 | 99.8 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | MBVX01000072.1:1-734:- | gene-YCR100C_MUCL30387 | rna-NM_001178807.1_MUCL30387 | cds-NP_010024.1_MUCL30387 | 77.1 | 77.1 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | MBVW01000346.1:1-734:- | gene-YCR100C_MUCL30388 | rna-NM_001178807.1_MUCL30388 | cds-NP_010024.1_MUCL30388 | 77.1 | 77.1 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:299400-300349:- | gene-YCR100C_MUCL39482 | rna-NM_001178807.1_MUCL39482 | cds-NP_010024.1_MUCL39482 | 98.4 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:293818-294768:- | gene-YCR100C_MUCL42920 | rna-NM_001178807.1_MUCL42920 | cds-NP_010024.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:300051-301000:- | gene-YCR100C_NCYC1407 | rna-NM_001178807.1_NCYC1407 | cds-NP_010024.1_NCYC1407 | 98.4 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:318566-319515:- | gene-YCR100C_PE2H3 | rna-NM_001178807.1_PE2H3 | cds-NP_010024.1_PE2H3 | 98.4 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:307153-308103:- | gene-YCR100C_PE2H4 | rna-NM_001178807.1_PE2H4 | cds-NP_010024.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:301271-302221:- | gene-YCR100C_S288C | rna-NM_001178807.1_S288C | cds-NP_010024.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000122.1:1871-2820:+ | gene-YCR100C_SA1 | rna-NM_001178807.1_SA1 | cds-NP_010024.1_SA1 | 98.4 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:298713-299662:- | gene-YCR100C_ThermosaccDry | rna-NM_001178807.1_ThermosaccDry | cds-NP_010024.1_ThermosaccDry | 98.2 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:308927-309877:- | gene-YCR100C_VR1 | rna-NM_001178807.1_VR1 | cds-NP_010024.1_VR1 | 99.0 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:295422-296371:- | gene-YCR100C_ZTW1 | rna-NM_001178807.1_ZTW1 | cds-NP_010024.1_ZTW1 | 98.4 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:332927-333876:- | gene-YCR100C_Sparadoxus | rna-NM_001178807.1_Sparadoxus | cds-NP_010024.1_Sparadoxus | 86.5 | 99.8 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |