Gene name: ELO3
Reference locus (S288C): YLR372W
Gene biotype: protein_coding
Description: Elongation of fatty acids protein 3; Elongase; involved in fatty acid and sphingolipid biosynthesis; synthesizes very long chain 20-26-carbon fatty acids from C18-CoA primers; involved in regulation of sphingolipid biosynthesis; lethality of the elo2 elo3 double null mutation is functionally complemented by human ELOVL1 and weakly complemented by human ELOVL3 or ELOV7; Belongs to the ELO family
Top 10 interactors (score): ELO2 (0.995); TSC13 (0.995); IFA38 (0.988); PHS1 (0.972); OLE1 (0.971); RVS161 (0.905); LAC1 (0.874); ERG2 (0.863); SCP1 (0.853); CEM1 (0.828); LCB3 (0.823); ELO1 (0.815); UPC2 (0.811); RVS167 (0.81); VRG4 (0.807); IPT1 (0.793); ERG25 (0.787); LAG1 (0.787); ERG3 (0.764); AUR1 (0.763)
Homologues (species, bitscore): ELOVL2 (Homo sapiens, 76.6); Elovl6 (Mus musculus, 76.3); elovl7a (Danio rerio, 85.1); elovl1 (Xenopus tropicalis, 76.6); Baldspot (Drosophila melanogaster, 84.7); elo-7 (Caenorhabditis elegans, 99.0); AT3G06470 (Arabidopsis thaliana, 87.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:816889-817926:+ | gene-YLR372W_AKU4011 | rna-NM_001182261.3_AKU4011 | cds-NP_013476.3_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000048.1:49040-50077:+ | gene-YLR372W_BG1 | rna-NM_001182261.3_BG1 | cds-NP_013476.3_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:855223-856260:+ | gene-YLR372W_Bruggeman | rna-NM_001182261.3_Bruggeman | cds-NP_013476.3_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:850716-851753:+ | gene-YLR372W_CAT1 | rna-NM_001182261.3_CAT1 | cds-NP_013476.3_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:851879-852916:+ | gene-YLR372W_CBS1585 | rna-NM_001182261.3_CBS1585 | cds-NP_013476.3_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:836121-837158:+ | gene-YLR372W_CBS436 | rna-NM_001182261.3_CBS436 | cds-NP_013476.3_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:888901-889938:+ | gene-YLR372W_CBS6412 | rna-NM_001182261.3_CBS6412 | cds-NP_013476.3_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:852772-853809:+ | gene-YLR372W_CBS6413 | rna-NM_001182261.3_CBS6413 | cds-NP_013476.3_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:852088-853125:+ | gene-YLR372W_CENPK1137D | rna-NM_001182261.3_CENPK1137D | cds-NP_013476.3_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:809470-810507:+ | gene-YLR372W_EthanolRed | rna-NM_001182261.3_EthanolRed | cds-NP_013476.3_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:838275-839312:+ | gene-YLR372W_FaliES1 | rna-NM_001182261.3_FaliES1 | cds-NP_013476.3_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000161.1:48859-49896:+ | gene-YLR372W_JAY291 | rna-NM_001182261.3_JAY291 | cds-NP_013476.3_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:852627-853664:+ | gene-YLR372W_MUCL30387 | rna-NM_001182261.3_MUCL30387 | cds-NP_013476.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:858257-859294:+ | gene-YLR372W_MUCL30388 | rna-NM_001182261.3_MUCL30388 | cds-NP_013476.3_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:853098-854135:+ | gene-YLR372W_MUCL39482 | rna-NM_001182261.3_MUCL39482 | cds-NP_013476.3_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:848395-849432:+ | gene-YLR372W_MUCL42920 | rna-NM_001182261.3_MUCL42920 | cds-NP_013476.3_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:867328-868365:+ | gene-YLR372W_NCIM3186 | rna-NM_001182261.3_NCIM3186 | cds-NP_013476.3_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:862320-863357:+ | gene-YLR372W_NCYC1407 | rna-NM_001182261.3_NCYC1407 | cds-NP_013476.3_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:849278-850315:+ | gene-YLR372W_PE2H3 | rna-NM_001182261.3_PE2H3 | cds-NP_013476.3_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:849022-850059:+ | gene-YLR372W_PE2H4 | rna-NM_001182261.3_PE2H4 | cds-NP_013476.3_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:867354-868391:+ | gene-YLR372W_S288C | rna-NM_001182261.3_S288C | cds-NP_013476.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000007.1:180301-181338:- | gene-YLR372W_SA1 | rna-NM_001182261.3_SA1 | cds-NP_013476.3_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:841356-842393:+ | gene-YLR372W_ThermosaccDry | rna-NM_001182261.3_ThermosaccDry | cds-NP_013476.3_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:854368-855405:+ | gene-YLR372W_VR1 | rna-NM_001182261.3_VR1 | cds-NP_013476.3_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000025.1:178542-179579:+ | gene-YLR372W_ZTW1 | rna-NM_001182261.3_ZTW1 | cds-NP_013476.3_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:827243-828280:+ | gene-YLR372W_Sparadoxus | rna-NM_001182261.3_Sparadoxus | cds-NP_013476.3_Sparadoxus | 92.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |