Gene name: ELG1
Reference locus (S288C): YOR144C
Gene biotype: protein_coding
Description: Telomere length regulation protein ELG1; Subunit of an alternative replication factor C complex; important for DNA replication and genome integrity; suppresses spontaneous DNA damage; involved in homologous recombination-mediated repair and telomere homeostasis; required for PCNA (Pol30p) unloading during DNA replication; Belongs to the ELG1 family
Top 10 interactors (score): POL30 (0.999); RFC3 (0.999); RFC5 (0.999); RFC2 (0.999); RFC4 (0.999); RAD24 (0.998); CTF18 (0.998); CTF4 (0.991); SRS2 (0.988); RAD52 (0.987); NTO1 (0.98); RAD27 (0.978); RFC1 (0.974); SMC3 (0.97); POL3 (0.967); POL1 (0.967); POL2 (0.964); RAD53 (0.96); DCC1 (0.958); RAD51 (0.953)
Homologues (species, bitscore): atad5a (Danio rerio, 52.0); elg1 (Drosophila melanogaster, 56.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:600252-602627:- | gene-YOR144C_AKU4011 | rna-NM_001183563.3_AKU4011 | cds-NP_014787.3_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000123.1:2100-4475:- | gene-YOR144C_BG1 | rna-NM_001183563.3_BG1 | cds-NP_014787.3_BG1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:584417-586792:- | gene-YOR144C_Bruggeman | rna-NM_001183563.3_Bruggeman | cds-NP_014787.3_Bruggeman | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:584434-586809:- | gene-YOR144C_CAT1 | rna-NM_001183563.3_CAT1 | cds-NP_014787.3_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:582727-585102:- | gene-YOR144C_CBS1585 | rna-NM_001183563.3_CBS1585 | cds-NP_014787.3_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:581141-583516:- | gene-YOR144C_CBS436 | rna-NM_001183563.3_CBS436 | cds-NP_014787.3_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:580365-582740:- | gene-YOR144C_CBS6412 | rna-NM_001183563.3_CBS6412 | cds-NP_014787.3_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:589135-591510:- | gene-YOR144C_CBS6413 | rna-NM_001183563.3_CBS6413 | cds-NP_014787.3_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:602473-604848:- | gene-YOR144C_CENPK1137D | rna-NM_001183563.3_CENPK1137D | cds-NP_014787.3_CENPK1137D | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:576564-578939:- | gene-YOR144C_EthanolRed | rna-NM_001183563.3_EthanolRed | cds-NP_014787.3_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:581417-583792:- | gene-YOR144C_FaliES1 | rna-NM_001183563.3_FaliES1 | cds-NP_014787.3_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000070.1:59757-62132:+ | gene-YOR144C_JAY291 | rna-NM_001183563.3_JAY291 | cds-NP_014787.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:589221-591596:- | gene-YOR144C_MUCL30387 | rna-NM_001183563.3_MUCL30387 | cds-NP_014787.3_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:595980-598355:- | gene-YOR144C_MUCL30388 | rna-NM_001183563.3_MUCL30388 | cds-NP_014787.3_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:590649-593024:- | gene-YOR144C_MUCL39482 | rna-NM_001183563.3_MUCL39482 | cds-NP_014787.3_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:600105-602480:- | gene-YOR144C_MUCL42920 | rna-NM_001183563.3_MUCL42920 | cds-NP_014787.3_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:602606-604981:- | gene-YOR144C_NCIM3186 | rna-NM_001183563.3_NCIM3186 | cds-NP_014787.3_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:590772-593147:- | gene-YOR144C_NCYC1407 | rna-NM_001183563.3_NCYC1407 | cds-NP_014787.3_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:589279-591654:- | gene-YOR144C_PE2H3 | rna-NM_001183563.3_PE2H3 | cds-NP_014787.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:599656-602031:- | gene-YOR144C_PE2H4 | rna-NM_001183563.3_PE2H4 | cds-NP_014787.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:602717-605092:- | gene-YOR144C_S288C | rna-NM_001183563.3_S288C | cds-NP_014787.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000006.1:19265-21640:- | gene-YOR144C_SA1 | rna-NM_001183563.3_SA1 | cds-NP_014787.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:580600-582975:- | gene-YOR144C_ThermosaccDry | rna-NM_001183563.3_ThermosaccDry | cds-NP_014787.3_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:644279-646654:- | gene-YOR144C_VR1 | rna-NM_001183563.3_VR1 | cds-NP_014787.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:314048-316423:- | gene-YOR144C_ZTW1 | rna-NM_001183563.3_ZTW1 | cds-NP_014787.3_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:585677-588052:- | gene-YOR144C_Sparadoxus | rna-NM_001183563.3_Sparadoxus | cds-NP_014787.3_Sparadoxus | 86.8 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |