Gene name: EGD2
Reference locus (S288C): YHR193C
Gene biotype: protein_coding
Description: Alpha subunit of the nascent polypeptide-associated complex (NAC); involved in protein sorting and translocation; associated with cytoplasmic ribosomes
Top 10 interactors (score): EGD1 (0.999); BTT1 (0.999); RPL17A (0.992); RPN11 (0.984); RPL25 (0.983); NOP1 (0.98); RPL16A (0.969); ERB1 (0.965); RPS15 (0.965); RPN6 (0.964); RPN5 (0.962); RPT4 (0.962); RPL5 (0.962); RPL31B (0.962); RPN3 (0.961); RPL19B (0.957); RPS8A (0.957); RPL31A (0.955); RPS3 (0.952); TMA108 (0.949)
Homologues (species, bitscore): NACA (Homo sapiens, 115.9); Naca (Mus musculus, 116.7); nacad (Danio rerio, 115.5); naca (Xenopus tropicalis, 111.7); Nacalpha (Drosophila melanogaster, 110.2); Y65B4BR.5 (Caenorhabditis elegans, 111.7); NACA3 (Arabidopsis thaliana, 111.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:474792-475316:- | gene-YHR193C_AKU4011 | rna-NM_001179324.3_AKU4011 | cds-NP_012063.3_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000141.1:42433-42957:+ | gene-YHR193C_BG1 | rna-NM_001179324.3_BG1 | cds-NP_012063.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:482034-482558:- | gene-YHR193C_Bruggeman | rna-NM_001179324.3_Bruggeman | cds-NP_012063.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:478315-478839:- | gene-YHR193C_CAT1 | rna-NM_001179324.3_CAT1 | cds-NP_012063.3_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:474244-474768:- | gene-YHR193C_CBS1585 | rna-NM_001179324.3_CBS1585 | cds-NP_012063.3_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:472184-472708:- | gene-YHR193C_CBS436 | rna-NM_001179324.3_CBS436 | cds-NP_012063.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:474343-474867:- | gene-YHR193C_CBS6412 | rna-NM_001179324.3_CBS6412 | cds-NP_012063.3_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:475634-476158:- | gene-YHR193C_CBS6413 | rna-NM_001179324.3_CBS6413 | cds-NP_012063.3_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:480900-481424:- | gene-YHR193C_CENPK1137D | rna-NM_001179324.3_CENPK1137D | cds-NP_012063.3_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:533331-533855:- | gene-YHR193C_EthanolRed | rna-NM_001179324.3_EthanolRed | cds-NP_012063.3_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:475775-476299:- | gene-YHR193C_FaliES1 | rna-NM_001179324.3_FaliES1 | cds-NP_012063.3_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000147.1:20935-21459:- | gene-YHR193C_JAY291 | rna-NM_001179324.3_JAY291 | cds-NP_012063.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:483360-483884:- | gene-YHR193C_MUCL30387 | rna-NM_001179324.3_MUCL30387 | cds-NP_012063.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:482783-483307:- | gene-YHR193C_MUCL30388 | rna-NM_001179324.3_MUCL30388 | cds-NP_012063.3_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:474155-474679:- | gene-YHR193C_MUCL39482 | rna-NM_001179324.3_MUCL39482 | cds-NP_012063.3_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:482099-482623:- | gene-YHR193C_MUCL42920 | rna-NM_001179324.3_MUCL42920 | cds-NP_012063.3_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:487594-488118:- | gene-YHR193C_NCIM3186 | rna-NM_001179324.3_NCIM3186 | cds-NP_012063.3_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:476618-477142:- | gene-YHR193C_NCYC1407 | rna-NM_001179324.3_NCYC1407 | cds-NP_012063.3_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:475774-476298:- | gene-YHR193C_PE2H3 | rna-NM_001179324.3_PE2H3 | cds-NP_012063.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:483201-483725:- | gene-YHR193C_PE2H4 | rna-NM_001179324.3_PE2H4 | cds-NP_012063.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:487712-488236:- | gene-YHR193C_S288C | rna-NM_001179324.3_S288C | cds-NP_012063.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000079.1:35861-36385:- | gene-YHR193C_SA1 | rna-NM_001179324.3_SA1 | cds-NP_012063.3_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:476858-477382:- | gene-YHR193C_ThermosaccDry | rna-NM_001179324.3_ThermosaccDry | cds-NP_012063.3_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:486076-486600:- | gene-YHR193C_VR1 | rna-NM_001179324.3_VR1 | cds-NP_012063.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:467093-467617:- | gene-YHR193C_ZTW1 | rna-NM_001179324.3_ZTW1 | cds-NP_012063.3_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:473798-474322:- | gene-YHR193C_Sparadoxus | rna-NM_001179324.3_Sparadoxus | cds-NP_012063.3_Sparadoxus | 95.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |