Gene name: EFB1
Reference locus (S288C): YAL003W
Gene biotype: protein_coding
Description: Translation elongation factor 1 beta; stimulates nucleotide exchange to regenerate EF-1 alpha-GTP for the next elongation cycle; part of the EF-1 complex, which facilitates binding of aminoacyl-tRNA to the ribosomal A site; human homolog EEF1B2 can complement yeast efb1 mutants; Belongs to the EF-1-beta/EF-1-delta family
Top 10 interactors (score): RPS9B (0.999); TEF2 (0.999); CAM1 (0.999); RPS3 (0.999); TMA19 (0.999); RPL10 (0.999); RPL28 (0.999); TEF1 (0.999); TEF4 (0.999); RPL8A (0.998); RPS0A (0.998); RPL18A (0.998); YGR201C (0.998); RPS15 (0.998); RPS31 (0.998); RPP1A (0.998); RPS7A (0.998); RPS5 (0.998); RPS19B (0.998); RPS9A (0.998)
Homologues (species, bitscore): EEF1B2 (Homo sapiens, 197.2); Eef1b2 (Mus musculus, 198.7); eef1b2 (Danio rerio, 201.4); eef1b2 (Xenopus tropicalis, 199.5); Ef1beta (Drosophila melanogaster, 210.7); eef-1B.1 (Caenorhabditis elegans, 184.5); eEF-1Bb1 (Arabidopsis thaliana, 152.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005295.1:127601-128588:+ | gene-YAL003W_AKU4011 | rna-NM_001178150.1_AKU4011 | cds-NP_009398.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000200.1:8942-9931:- | gene-YAL003W_BG1 | rna-NM_001178150.1_BG1 | cds-NP_009398.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005503.1:142405-143394:+ | gene-YAL003W_Bruggeman | rna-NM_001178150.1_Bruggeman | cds-NP_009398.1_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005519.1:128990-129979:+ | gene-YAL003W_CAT1 | rna-NM_001178150.1_CAT1 | cds-NP_009398.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005359.1:140298-141285:+ | gene-YAL003W_CBS1585 | rna-NM_001178150.1_CBS1585 | cds-NP_009398.1_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005343.1:140607-141596:+ | gene-YAL003W_CBS436 | rna-NM_001178150.1_CBS436 | cds-NP_009398.1_CBS436 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:753040-754027:+ | gene-YAL003W_CBS6412 | rna-NM_001178150.1_CBS6412 | cds-NP_009398.1_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005311.1:138567-139554:+ | gene-YAL003W_CBS6413 | rna-NM_001178150.1_CBS6413 | cds-NP_009398.1_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001522.1:142084-143068:+ | gene-YAL003W_CENPK1137D | rna-NM_001178150.1_CENPK1137D | cds-NP_009398.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005471.1:128159-129148:+ | gene-YAL003W_EthanolRed | rna-NM_001178150.1_EthanolRed | cds-NP_009398.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005535.1:143814-144803:+ | gene-YAL003W_FaliES1 | rna-NM_001178150.1_FaliES1 | cds-NP_009398.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000248.1:1189-2178:+ | gene-YAL003W_JAY291 | rna-NM_001178150.1_JAY291 | cds-NP_009398.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005407.1:143309-144296:+ | gene-YAL003W_MUCL30387 | rna-NM_001178150.1_MUCL30387 | cds-NP_009398.1_MUCL30387 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005439.1:140807-141794:+ | gene-YAL003W_MUCL30388 | rna-NM_001178150.1_MUCL30388 | cds-NP_009398.1_MUCL30388 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005279.1:139574-140561:+ | gene-YAL003W_MUCL39482 | rna-NM_001178150.1_MUCL39482 | cds-NP_009398.1_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005423.1:141707-142694:+ | gene-YAL003W_MUCL42920 | rna-NM_001178150.1_MUCL42920 | cds-NP_009398.1_MUCL42920 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011810.1:142051-143037:+ | gene-YAL003W_NCIM3186 | rna-NM_001178150.1_NCIM3186 | cds-NP_009398.1_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005263.1:126962-127949:+ | gene-YAL003W_NCYC1407 | rna-NM_001178150.1_NCYC1407 | cds-NP_009398.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994140.1:128887-129876:+ | gene-YAL003W_PE2H3 | rna-NM_001178150.1_PE2H3 | cds-NP_009398.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999872.1:128606-129595:+ | gene-YAL003W_PE2H4 | rna-NM_001178150.1_PE2H4 | cds-NP_009398.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001133.9:142174-143160:+ | gene-YAL003W_S288C | rna-NM_001178150.1_S288C | cds-NP_009398.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000100.1:905-1894:+ | gene-YAL003W_SA1 | rna-NM_001178150.1_SA1 | cds-NP_009398.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005487.1:142823-143812:+ | gene-YAL003W_ThermosaccDry | rna-NM_001178150.1_ThermosaccDry | cds-NP_009398.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005455.1:147379-148368:+ | gene-YAL003W_VR1 | rna-NM_001178150.1_VR1 | cds-NP_009398.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000002.1:114646-115634:+ | gene-YAL003W_ZTW1 | rna-NM_001178150.1_ZTW1 | cds-NP_009398.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047487.1:132225-133209:+ | gene-YAL003W_Sparadoxus | rna-NM_001178150.1_Sparadoxus | cds-NP_009398.1_Sparadoxus | 96.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |