Gene name: ECM9
Reference locus (S288C): YKR004C
Gene biotype: protein_coding
Description: Protein ecm9; May be involved in cell wall organization and biogenesis
Top 10 interactors (score): YML119W (0.84); SKG1 (0.78); YKL033W-A (0.779); RRT8 (0.748); YPR089W (0.745); PIR5 (0.744); MSC3 (0.716); TPH3 (0.714); PRM10 (0.697); SAE3 (0.697); EMC3 (0.696); ICS2 (0.695); PSP2 (0.677); NAB6 (0.677); PFF1 (0.675); GPI14 (0.67); SEA4 (0.65); STE23 (0.616); KSH1 (0.616); TRM2 (0.616)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:432822-434059:- | gene-YKR004C_AKU4011 | rna-NM_001179794.3_AKU4011 | cds-NP_012929.4_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000113.1:209869-211106:+ | gene-YKR004C_BG1 | rna-NM_001179794.3_BG1 | cds-NP_012929.4_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:454506-455743:- | gene-YKR004C_Bruggeman | rna-NM_001179794.3_Bruggeman | cds-NP_012929.4_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:449611-450848:- | gene-YKR004C_CAT1 | rna-NM_001179794.3_CAT1 | cds-NP_012929.4_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:445541-446778:- | gene-YKR004C_CBS1585 | rna-NM_001179794.3_CBS1585 | cds-NP_012929.4_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:444380-445617:- | gene-YKR004C_CBS436 | rna-NM_001179794.3_CBS436 | cds-NP_012929.4_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:429699-430936:- | gene-YKR004C_CBS6412 | rna-NM_001179794.3_CBS6412 | cds-NP_012929.4_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:445394-446631:- | gene-YKR004C_CBS6413 | rna-NM_001179794.3_CBS6413 | cds-NP_012929.4_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:446476-447713:- | gene-YKR004C_CENPK1137D | rna-NM_001179794.3_CENPK1137D | cds-NP_012929.4_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:443303-444540:- | gene-YKR004C_EthanolRed | rna-NM_001179794.3_EthanolRed | cds-NP_012929.4_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:445392-446629:- | gene-YKR004C_FaliES1 | rna-NM_001179794.3_FaliES1 | cds-NP_012929.4_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000120.1:10197-11434:+ | gene-YKR004C_JAY291 | rna-NM_001179794.3_JAY291 | cds-NP_012929.4_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:453820-455057:- | gene-YKR004C_MUCL30387 | rna-NM_001179794.3_MUCL30387 | cds-NP_012929.4_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:449431-450668:- | gene-YKR004C_MUCL30388 | rna-NM_001179794.3_MUCL30388 | cds-NP_012929.4_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:444858-446095:- | gene-YKR004C_MUCL39482 | rna-NM_001179794.3_MUCL39482 | cds-NP_012929.4_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:450665-451902:- | gene-YKR004C_MUCL42920 | rna-NM_001179794.3_MUCL42920 | cds-NP_012929.4_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:446788-448025:- | gene-YKR004C_NCIM3186 | rna-NM_001179794.3_NCIM3186 | cds-NP_012929.4_NCIM3186 | 94.9 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:445066-446303:- | gene-YKR004C_NCYC1407 | rna-NM_001179794.3_NCYC1407 | cds-NP_012929.4_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:469718-470955:- | gene-YKR004C_PE2H3 | rna-NM_001179794.3_PE2H3 | cds-NP_012929.4_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:454460-455697:- | gene-YKR004C_PE2H4 | rna-NM_001179794.3_PE2H4 | cds-NP_012929.4_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:446799-448036:- | gene-YKR004C_S288C | rna-NM_001179794.3_S288C | cds-NP_012929.4_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000027.1:125064-126301:- | gene-YKR004C_SA1 | rna-NM_001179794.3_SA1 | cds-NP_012929.4_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:445490-446727:- | gene-YKR004C_ThermosaccDry | rna-NM_001179794.3_ThermosaccDry | cds-NP_012929.4_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:444741-445978:- | gene-YKR004C_VR1 | rna-NM_001179794.3_VR1 | cds-NP_012929.4_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:443528-444765:- | gene-YKR004C_ZTW1 | rna-NM_001179794.3_ZTW1 | cds-NP_012929.4_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:468476-469729:- | gene-YKR004C_Sparadoxus | rna-NM_001179794.3_Sparadoxus | cds-NP_012929.4_Sparadoxus | 85.2 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |