Gene name: ECM4
Reference locus (S288C): YKR076W
Gene biotype: protein_coding
Description: Glutathione S-transferase omega-like 2; S-glutathionyl-(chloro)hydroquinone reductase (GS-HQR); glutathione transferase involved in cell-surface biosynthesis and architecture; catalyzes glutathione (GSH)-dependent reduction of GS-trichloro-p-hydroquinone to trichloro-p-hydroquinone; expression upregulated upon exposure to genotoxic agents, such as methyl methanesulfonate, cisplatin and bleomycin; not an essential gene; similar to YGR154C; green fluorescent protein (GFP)-fusion protein localizes to cytoplasm; Belongs to the GST superfamily. Omega family
Top 10 interactors (score): PRX1 (0.92); YMR090W (0.916); PRC1 (0.913); YBR139W (0.913); YCF1 (0.913); GTT1 (0.909); MSC1 (0.905); YBT1 (0.9); GTT2 (0.879); TSA2 (0.863); DCS2 (0.856); NQM1 (0.851); ATG34 (0.802); GRX2 (0.792); RTN2 (0.78); YML131W (0.773); TFS1 (0.744); YLL056C (0.735); AMS1 (0.706); YLR297W (0.704)
Homologues (species, bitscore): AT5G45020 (Arabidopsis thaliana, 214.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:568312-569424:+ | gene-YKR076W_AKU4011 | rna-NM_001179866.3_AKU4011 | cds-NP_013002.3_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000113.1:74802-75914:- | gene-YKR076W_BG1 | rna-NM_001179866.3_BG1 | cds-NP_013002.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:590890-592002:+ | gene-YKR076W_Bruggeman | rna-NM_001179866.3_Bruggeman | cds-NP_013002.3_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:586410-587522:+ | gene-YKR076W_CAT1 | rna-NM_001179866.3_CAT1 | cds-NP_013002.3_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:580799-581911:+ | gene-YKR076W_CBS1585 | rna-NM_001179866.3_CBS1585 | cds-NP_013002.3_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:579184-580296:+ | gene-YKR076W_CBS436 | rna-NM_001179866.3_CBS436 | cds-NP_013002.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:564087-565199:+ | gene-YKR076W_CBS6412 | rna-NM_001179866.3_CBS6412 | cds-NP_013002.3_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:580617-581729:+ | gene-YKR076W_CBS6413 | rna-NM_001179866.3_CBS6413 | cds-NP_013002.3_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:581936-583049:+ | gene-YKR076W_CENPK1137D | rna-NM_001179866.3_CENPK1137D | cds-NP_013002.3_CENPK1137D | 99.5 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:578122-579234:+ | gene-YKR076W_EthanolRed | rna-NM_001179866.3_EthanolRed | cds-NP_013002.3_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:582017-583129:+ | gene-YKR076W_FaliES1 | rna-NM_001179866.3_FaliES1 | cds-NP_013002.3_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000426.1:61804-62916:- | gene-YKR076W_JAY291 | rna-NM_001179866.3_JAY291 | cds-NP_013002.3_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:590386-591498:+ | gene-YKR076W_MUCL30387 | rna-NM_001179866.3_MUCL30387 | cds-NP_013002.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:584728-585840:+ | gene-YKR076W_MUCL30388 | rna-NM_001179866.3_MUCL30388 | cds-NP_013002.3_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:579640-580752:+ | gene-YKR076W_MUCL39482 | rna-NM_001179866.3_MUCL39482 | cds-NP_013002.3_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:585663-586775:+ | gene-YKR076W_MUCL42920 | rna-NM_001179866.3_MUCL42920 | cds-NP_013002.3_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:582272-583384:+ | gene-YKR076W_NCIM3186 | rna-NM_001179866.3_NCIM3186 | cds-NP_013002.3_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:580052-581164:+ | gene-YKR076W_NCYC1407 | rna-NM_001179866.3_NCYC1407 | cds-NP_013002.3_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:605219-606331:+ | gene-YKR076W_PE2H3 | rna-NM_001179866.3_PE2H3 | cds-NP_013002.3_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:589623-590735:+ | gene-YKR076W_PE2H4 | rna-NM_001179866.3_PE2H4 | cds-NP_013002.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:582283-583395:+ | gene-YKR076W_S288C | rna-NM_001179866.3_S288C | cds-NP_013002.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000029.1:98456-99568:- | gene-YKR076W_SA1 | rna-NM_001179866.3_SA1 | cds-NP_013002.3_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:581264-582376:+ | gene-YKR076W_ThermosaccDry | rna-NM_001179866.3_ThermosaccDry | cds-NP_013002.3_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:580529-581641:+ | gene-YKR076W_VR1 | rna-NM_001179866.3_VR1 | cds-NP_013002.3_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:578247-579359:+ | gene-YKR076W_ZTW1 | rna-NM_001179866.3_ZTW1 | cds-NP_013002.3_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:603494-604606:+ | gene-YKR076W_Sparadoxus | rna-NM_001179866.3_Sparadoxus | cds-NP_013002.3_Sparadoxus | 89.3 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |