ECM38 (YLR299W)


Gene profile

Gene name: ECM38
Reference locus (S288C): YLR299W
Gene biotype: protein_coding

Description: Glutathione hydrolase proenzyme; Gamma-glutamyltranspeptidase; major glutathione-degrading enzyme; involved in detoxification of electrophilic xenobiotics; expression induced mainly by nitrogen starvation; Belongs to the gamma-glutamyltransferase family

Top 10 interactors (score): GSH2 (0.991); GSH1 (0.986); DUG1 (0.984); YCF1 (0.978); GLR1 (0.971); OXP1 (0.958); PRX1 (0.932); URE2 (0.929); GLN1 (0.926); GCG1 (0.918); GAD1 (0.911); YBT1 (0.907); GTT1 (0.904); DUG3 (0.903); AAT1 (0.9); GLT1 (0.894); GDH3 (0.893); GDH2 (0.889); GDH1 (0.889); ALT2 (0.847)

Homologues (species, bitscore): GGT1 (Homo sapiens, 235.7); Ggt1 (Mus musculus, 246.9); ggt1a (Danio rerio, 248.8); ggt1 (Xenopus tropicalis, 253.8); Ggt-1 (Drosophila melanogaster, 229.2); C53D5.5 (Caenorhabditis elegans, 247.7); GGT4 (Arabidopsis thaliana, 243.4)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005306.1:674875-676857:+ gene-YLR299W_AKU4011 rna-NM_001182187.1_AKU4011 cds-NP_013402.1_AKU4011 99.8 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000170.1:55790-57772:- gene-YLR299W_BG1 rna-NM_001182187.1_BG1 cds-NP_013402.1_BG1 99.5 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005514.1:710705-712687:+ gene-YLR299W_Bruggeman rna-NM_001182187.1_Bruggeman cds-NP_013402.1_Bruggeman 99.3 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005530.1:708615-710597:+ gene-YLR299W_CAT1 rna-NM_001182187.1_CAT1 cds-NP_013402.1_CAT1 99.4 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005370.1:709801-711783:+ gene-YLR299W_CBS1585 rna-NM_001182187.1_CBS1585 cds-NP_013402.1_CBS1585 99.8 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005354.1:694395-696377:+ gene-YLR299W_CBS436 rna-NM_001182187.1_CBS436 cds-NP_013402.1_CBS436 99.3 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005338.1:672441-674423:+ gene-YLR299W_CBS6412 rna-NM_001182187.1_CBS6412 cds-NP_013402.1_CBS6412 99.7 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005322.1:710467-712449:+ gene-YLR299W_CBS6413 rna-NM_001182187.1_CBS6413 cds-NP_013402.1_CBS6413 99.7 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001533.1:710663-712645:+ gene-YLR299W_CENPK1137D rna-NM_001182187.1_CENPK1137D cds-NP_013402.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005482.1:668153-670135:+ gene-YLR299W_EthanolRed rna-NM_001182187.1_EthanolRed cds-NP_013402.1_EthanolRed 99.6 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005546.1:697353-699335:+ gene-YLR299W_FaliES1 rna-NM_001182187.1_FaliES1 cds-NP_013402.1_FaliES1 99.6 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000359.1:6444-8426:- gene-YLR299W_JAY291 rna-NM_001182187.1_JAY291 cds-NP_013402.1_JAY291 99.5 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005418.1:709939-711921:+ gene-YLR299W_MUCL30387 rna-NM_001182187.1_MUCL30387 cds-NP_013402.1_MUCL30387 99.3 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005450.1:715521-717503:+ gene-YLR299W_MUCL30388 rna-NM_001182187.1_MUCL30388 cds-NP_013402.1_MUCL30388 99.3 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005290.1:711031-713013:+ gene-YLR299W_MUCL39482 rna-NM_001182187.1_MUCL39482 cds-NP_013402.1_MUCL39482 99.8 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005434.1:706188-708170:+ gene-YLR299W_MUCL42920 rna-NM_001182187.1_MUCL42920 cds-NP_013402.1_MUCL42920 99.4 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011821.1:726043-728025:+ gene-YLR299W_NCIM3186 rna-NM_001182187.1_NCIM3186 cds-NP_013402.1_NCIM3186 99.3 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005274.1:720373-722355:+ gene-YLR299W_NCYC1407 rna-NM_001182187.1_NCYC1407 cds-NP_013402.1_NCYC1407 99.7 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994151.1:708163-710145:+ gene-YLR299W_PE2H3 rna-NM_001182187.1_PE2H3 cds-NP_013402.1_PE2H3 99.5 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999883.1:707907-709889:+ gene-YLR299W_PE2H4 rna-NM_001182187.1_PE2H4 cds-NP_013402.1_PE2H4 99.5 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001144.5:726069-728051:+ gene-YLR299W_S288C rna-NM_001182187.1_S288C cds-NP_013402.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000039.1:56638-58620:- gene-YLR299W_SA1 rna-NM_001182187.1_SA1 cds-NP_013402.1_SA1 99.8 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005498.1:699247-701229:+ gene-YLR299W_ThermosaccDry rna-NM_001182187.1_ThermosaccDry cds-NP_013402.1_ThermosaccDry 99.7 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005466.1:711132-713114:+ gene-YLR299W_VR1 rna-NM_001182187.1_VR1 cds-NP_013402.1_VR1 99.5 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000025.1:37674-39656:+ gene-YLR299W_ZTW1 rna-NM_001182187.1_ZTW1 cds-NP_013402.1_ZTW1 99.4 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047498.1:685282-687264:+ gene-YLR299W_Sparadoxus rna-NM_001182187.1_Sparadoxus cds-NP_013402.1_Sparadoxus 89.1 100.0 Verified 1 1 1 False True False False False

Additional files