Gene name: ECM34
Reference locus (S288C): YHL043W
Gene biotype: protein_coding
Description: Protein of unknown function; member of the DUP380 subfamily of conserved, often subtelomerically-encoded proteins; SWAT-GFP, seamless-GFP and mCherry C-terminal fusion proteins localize to the cytosol
Top 10 interactors (score): SSU1 (0.899); YHL044W (0.766); YHL048C-A (0.765); YHL041W (0.765); YHL046W-A (0.765); YHL042W (0.758); YKL223W (0.753); FZF1 (0.748); YHL045W (0.717); PAU16 (0.713); YKL225W (0.712); MRPS12 (0.711); PAU13 (0.705); YHL049C (0.671); PET117 (0.656); SRY1 (0.652); YKL222C (0.65); YHL050C (0.62); CSS1 (0.62); YDR338C (0.568)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:9757-10268:+ | gene-YHL043W_AKU4011 | rna-NM_001179123.1_AKU4011 | cds-NP_011820.1_AKU4011 | 98.4 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000128.1:1-353:- | gene-YHL043W_BG1 | rna-NM_001179123.1_BG1 | cds-NP_011820.1_BG1 | 67.4 | 68.8 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:16424-16935:+ | gene-YHL043W_Bruggeman | rna-NM_001179123.1_Bruggeman | cds-NP_011820.1_Bruggeman | 99.6 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:10677-11188:+ | gene-YHL043W_CAT1 | rna-NM_001179123.1_CAT1 | cds-NP_011820.1_CAT1 | 99.6 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:10361-10872:+ | gene-YHL043W_CBS1585 | rna-NM_001179123.1_CBS1585 | cds-NP_011820.1_CBS1585 | 98.4 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:2946-3457:+ | gene-YHL043W_CBS436 | rna-NM_001179123.1_CBS436 | cds-NP_011820.1_CBS436 | 99.2 | 99.8 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:10310-10821:+ | gene-YHL043W_CBS6412 | rna-NM_001179123.1_CBS6412 | cds-NP_011820.1_CBS6412 | 98.4 | 99.8 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:9776-10287:+ | gene-YHL043W_CBS6413 | rna-NM_001179123.1_CBS6413 | cds-NP_011820.1_CBS6413 | 98.4 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:8074-8579:+ | gene-YHL043W_CENPK1137D | rna-NM_001179123.1_CENPK1137D | cds-NP_011820.1_CENPK1137D | 97.8 | 98.6 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:9991-10502:+ | gene-YHL043W_EthanolRed | rna-NM_001179123.1_EthanolRed | cds-NP_011820.1_EthanolRed | 98.4 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:10306-10817:+ | gene-YHL043W_FaliES1 | rna-NM_001179123.1_FaliES1 | cds-NP_011820.1_FaliES1 | 98.4 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000157.1:2267-2778:+ | gene-YHL043W_JAY291 | rna-NM_001179123.1_JAY291 | cds-NP_011820.1_JAY291 | 99.4 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:12258-12769:+ | gene-YHL043W_MUCL30387 | rna-NM_001179123.1_MUCL30387 | cds-NP_011820.1_MUCL30387 | 99.6 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:14095-14606:+ | gene-YHL043W_MUCL30388 | rna-NM_001179123.1_MUCL30388 | cds-NP_011820.1_MUCL30388 | 99.6 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:9352-9863:+ | gene-YHL043W_MUCL39482 | rna-NM_001179123.1_MUCL39482 | cds-NP_011820.1_MUCL39482 | 98.4 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:13323-13834:+ | gene-YHL043W_MUCL42920 | rna-NM_001179123.1_MUCL42920 | cds-NP_011820.1_MUCL42920 | 97.4 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:14783-15295:+ | gene-YHL043W_NCIM3186 | rna-NM_001179123.1_NCIM3186 | cds-NP_011820.1_NCIM3186 | 97.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:8588-9099:+ | gene-YHL043W_NCYC1407 | rna-NM_001179123.1_NCYC1407 | cds-NP_011820.1_NCYC1407 | 98.4 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:5130-5641:+ | gene-YHL043W_PE2H3 | rna-NM_001179123.1_PE2H3 | cds-NP_011820.1_PE2H3 | 99.0 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:12506-13017:+ | gene-YHL043W_PE2H4 | rna-NM_001179123.1_PE2H4 | cds-NP_011820.1_PE2H4 | 99.4 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:14901-15413:+ | gene-YHL043W_S288C | rna-NM_001179123.1_S288C | cds-NP_011820.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000150.1:2969-3480:+ | gene-YHL043W_SA1 | rna-NM_001179123.1_SA1 | cds-NP_011820.1_SA1 | 99.6 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:11426-11937:+ | gene-YHL043W_ThermosaccDry | rna-NM_001179123.1_ThermosaccDry | cds-NP_011820.1_ThermosaccDry | 98.4 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:16113-16624:+ | gene-YHL043W_VR1 | rna-NM_001179123.1_VR1 | cds-NP_011820.1_VR1 | 99.6 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:2605-3116:+ | gene-YHL043W_ZTW1 | rna-NM_001179123.1_ZTW1 | cds-NP_011820.1_ZTW1 | 98.6 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:3047-3570:+ | gene-YHL043W_Sparadoxus | rna-NM_001179123.1_Sparadoxus | cds-NP_011820.1_Sparadoxus | 79.5 | 99.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |