Gene name: ECM31
Reference locus (S288C): YBR176W
Gene biotype: protein_coding
Description: 3-methyl-2-oxobutanoate hydroxymethyltransferase; Ketopantoate hydroxymethyltransferase; required for pantothenic acid biosynthesis, converts 2-oxoisovalerate into 2-dehydropantoate
Top 10 interactors (score): PAN6 (0.999); PAN5 (0.99); ILV3 (0.956); BAT2 (0.948); BAT1 (0.926); TRP5 (0.922); CAB1 (0.864); TRP3 (0.767); ILV5 (0.753); FMS1 (0.746); CAB2 (0.725); ILV1 (0.718); TOP3 (0.678); CAB3 (0.665); ASF2 (0.615); YGL081W (0.615); GUA1 (0.611); MTD1 (0.604); YLR126C (0.601); HEM3 (0.594)
Homologues (species, bitscore): PANB2 (Arabidopsis thaliana, 213.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:566592-567530:+ | gene-YBR176W_AKU4011 | rna-NM_001178524.3_AKU4011 | cds-NP_009735.3_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:557076-558014:+ | gene-YBR176W_BG1 | rna-NM_001178524.3_BG1 | cds-NP_009735.3_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:569616-570554:+ | gene-YBR176W_Bruggeman | rna-NM_001178524.3_Bruggeman | cds-NP_009735.3_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:463703-464641:+ | gene-YBR176W_CAT1 | rna-NM_001178524.3_CAT1 | cds-NP_009735.3_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:558373-559311:+ | gene-YBR176W_CBS1585 | rna-NM_001178524.3_CBS1585 | cds-NP_009735.3_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:566429-567367:+ | gene-YBR176W_CBS436 | rna-NM_001178524.3_CBS436 | cds-NP_009735.3_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:655858-656796:+ | gene-YBR176W_CBS6412 | rna-NM_001178524.3_CBS6412 | cds-NP_009735.3_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:563929-564867:+ | gene-YBR176W_CBS6413 | rna-NM_001178524.3_CBS6413 | cds-NP_009735.3_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:577517-578455:+ | gene-YBR176W_CENPK1137D | rna-NM_001178524.3_CENPK1137D | cds-NP_009735.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:692433-693371:+ | gene-YBR176W_EthanolRed | rna-NM_001178524.3_EthanolRed | cds-NP_009735.3_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:582665-583603:+ | gene-YBR176W_FaliES1 | rna-NM_001178524.3_FaliES1 | cds-NP_009735.3_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000310.1:22474-23412:+ | gene-YBR176W_JAY291 | rna-NM_001178524.3_JAY291 | cds-NP_009735.3_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:571246-572184:+ | gene-YBR176W_MUCL30387 | rna-NM_001178524.3_MUCL30387 | cds-NP_009735.3_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:570555-571493:+ | gene-YBR176W_MUCL30388 | rna-NM_001178524.3_MUCL30388 | cds-NP_009735.3_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:556746-557684:+ | gene-YBR176W_MUCL39482 | rna-NM_001178524.3_MUCL39482 | cds-NP_009735.3_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:566671-567609:+ | gene-YBR176W_MUCL42920 | rna-NM_001178524.3_MUCL42920 | cds-NP_009735.3_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:583517-584455:+ | gene-YBR176W_NCIM3186 | rna-NM_001178524.3_NCIM3186 | cds-NP_009735.3_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:559316-560254:+ | gene-YBR176W_NCYC1407 | rna-NM_001178524.3_NCYC1407 | cds-NP_009735.3_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:571948-572886:+ | gene-YBR176W_PE2H3 | rna-NM_001178524.3_PE2H3 | cds-NP_009735.3_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:569624-570562:+ | gene-YBR176W_PE2H4 | rna-NM_001178524.3_PE2H4 | cds-NP_009735.3_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:583720-584658:+ | gene-YBR176W_S288C | rna-NM_001178524.3_S288C | cds-NP_009735.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000032.1:104940-105878:+ | gene-YBR176W_SA1 | rna-NM_001178524.3_SA1 | cds-NP_009735.3_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:581675-582613:+ | gene-YBR176W_ThermosaccDry | rna-NM_001178524.3_ThermosaccDry | cds-NP_009735.3_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:563099-564037:+ | gene-YBR176W_VR1 | rna-NM_001178524.3_VR1 | cds-NP_009735.3_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:556791-557729:+ | gene-YBR176W_ZTW1 | rna-NM_001178524.3_ZTW1 | cds-NP_009735.3_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:594149-595087:+ | gene-YBR176W_Sparadoxus | rna-NM_001178524.3_Sparadoxus | cds-NP_009735.3_Sparadoxus | 89.6 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |