Gene name: ECM30
Reference locus (S288C): YLR436C
Gene biotype: protein_coding
Description: Protein of unknown function; may play a role in cell wall biosynthesis, mutants have abormal relative levels of mannose and glucose and have Gap1p sorting and transport defects; (GFP)-fusion protein localizes to the cytoplasm
Top 10 interactors (score): UBP15 (0.993); YPL191C (0.813); YIR020C (0.766); YCR022C (0.766); PAR32 (0.765); FDO1 (0.749); YGR176W (0.747); MAK32 (0.746); YCR051W (0.714); TDA10 (0.712); YCR007C (0.693); UBP14 (0.681); BUD7 (0.626); BCH1 (0.626); IMG1 (0.611); ARE1 (0.589); DUF1 (0.582); EAF7 (0.581); RRT12 (0.577); ADP1 (0.573)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:945679-949503:- | gene-YLR436C_AKU4011 | rna-NM_001182324.1_AKU4011 | cds-NP_013540.1_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000048.1:178133-181957:- | gene-YLR436C_BG1 | rna-NM_001182324.1_BG1 | cds-NP_013540.1_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:983984-987808:- | gene-YLR436C_Bruggeman | rna-NM_001182324.1_Bruggeman | cds-NP_013540.1_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:979998-983822:- | gene-YLR436C_CAT1 | rna-NM_001182324.1_CAT1 | cds-NP_013540.1_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:981276-985100:- | gene-YLR436C_CBS1585 | rna-NM_001182324.1_CBS1585 | cds-NP_013540.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:970617-974441:- | gene-YLR436C_CBS436 | rna-NM_001182324.1_CBS436 | cds-NP_013540.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:1017316-1021140:- | gene-YLR436C_CBS6412 | rna-NM_001182324.1_CBS6412 | cds-NP_013540.1_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:982061-985885:- | gene-YLR436C_CBS6413 | rna-NM_001182324.1_CBS6413 | cds-NP_013540.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:992038-995862:- | gene-YLR436C_CENPK1137D | rna-NM_001182324.1_CENPK1137D | cds-NP_013540.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:938704-942528:- | gene-YLR436C_EthanolRed | rna-NM_001182324.1_EthanolRed | cds-NP_013540.1_EthanolRed | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:973975-977799:- | gene-YLR436C_FaliES1 | rna-NM_001182324.1_FaliES1 | cds-NP_013540.1_FaliES1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000194.1:40889-44713:+ | gene-YLR436C_JAY291 | rna-NM_001182324.1_JAY291 | cds-NP_013540.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:982845-986669:- | gene-YLR436C_MUCL30387 | rna-NM_001182324.1_MUCL30387 | cds-NP_013540.1_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:990202-994026:- | gene-YLR436C_MUCL30388 | rna-NM_001182324.1_MUCL30388 | cds-NP_013540.1_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:982496-986320:- | gene-YLR436C_MUCL39482 | rna-NM_001182324.1_MUCL39482 | cds-NP_013540.1_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:982993-986817:- | gene-YLR436C_MUCL42920 | rna-NM_001182324.1_MUCL42920 | cds-NP_013540.1_MUCL42920 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:1007395-1011219:- | gene-YLR436C_NCIM3186 | rna-NM_001182324.1_NCIM3186 | cds-NP_013540.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:991924-995748:- | gene-YLR436C_NCYC1407 | rna-NM_001182324.1_NCYC1407 | cds-NP_013540.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:978373-982197:- | gene-YLR436C_PE2H3 | rna-NM_001182324.1_PE2H3 | cds-NP_013540.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:978117-981941:- | gene-YLR436C_PE2H4 | rna-NM_001182324.1_PE2H4 | cds-NP_013540.1_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:1007421-1011245:- | gene-YLR436C_S288C | rna-NM_001182324.1_S288C | cds-NP_013540.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000007.1:48713-52537:+ | gene-YLR436C_SA1 | rna-NM_001182324.1_SA1 | cds-NP_013540.1_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:977054-980878:- | gene-YLR436C_ThermosaccDry | rna-NM_001182324.1_ThermosaccDry | cds-NP_013540.1_ThermosaccDry | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:983478-987302:- | gene-YLR436C_VR1 | rna-NM_001182324.1_VR1 | cds-NP_013540.1_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000025.1:307327-311151:- | gene-YLR436C_ZTW1 | rna-NM_001182324.1_ZTW1 | cds-NP_013540.1_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:956474-960301:- | gene-YLR436C_Sparadoxus | rna-NM_001182324.1_Sparadoxus | cds-NP_013540.1_Sparadoxus | 89.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |