Gene name: ECM3
Reference locus (S288C): YOR092W
Gene biotype: protein_coding
Description: Auxin efflux carrier family protein; Non-essential protein of unknown function; involved in signal transduction and the genotoxic response; induced rapidly in response to treatment with 8-methoxypsoralen and UVA irradiation; relocalizes from ER to cytoplasm upon DNA replication stress; ECM3 has a paralog, YNL095C, that arose from the whole genome duplication
Top 10 interactors (score): YET2 (0.717); ECM8 (0.713); KNH1 (0.692); YMR196W (0.691); YDR338C (0.614); RIB1 (0.553); ARO2 (0.505); TPA1 (0.498); UGO1 (0.495); PRP8 (0.485); KIN1 (0.481); YML131W (0.461); INP52 (0.453); TRL1 (0.451); DUR3 (0.45); TUS1 (0.45)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:479478-481319:+ | gene-YOR092W_AKU4011 | rna-NM_001183511.1_AKU4011 | cds-NP_014735.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000171.1:98012-99853:- | gene-YOR092W_BG1 | rna-NM_001183511.1_BG1 | cds-NP_014735.1_BG1 | 99.4 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:482787-484628:+ | gene-YOR092W_Bruggeman | rna-NM_001183511.1_Bruggeman | cds-NP_014735.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:482762-484603:+ | gene-YOR092W_CAT1 | rna-NM_001183511.1_CAT1 | cds-NP_014735.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:474770-476611:+ | gene-YOR092W_CBS1585 | rna-NM_001183511.1_CBS1585 | cds-NP_014735.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:479522-481363:+ | gene-YOR092W_CBS436 | rna-NM_001183511.1_CBS436 | cds-NP_014735.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:473511-475352:+ | gene-YOR092W_CBS6412 | rna-NM_001183511.1_CBS6412 | cds-NP_014735.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:480806-482647:+ | gene-YOR092W_CBS6413 | rna-NM_001183511.1_CBS6413 | cds-NP_014735.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:495172-497013:+ | gene-YOR092W_CENPK1137D | rna-NM_001183511.1_CENPK1137D | cds-NP_014735.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:476009-477850:+ | gene-YOR092W_EthanolRed | rna-NM_001183511.1_EthanolRed | cds-NP_014735.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:479518-481359:+ | gene-YOR092W_FaliES1 | rna-NM_001183511.1_FaliES1 | cds-NP_014735.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000063.1:78159-80000:- | gene-YOR092W_JAY291 | rna-NM_001183511.1_JAY291 | cds-NP_014735.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:487323-489164:+ | gene-YOR092W_MUCL30387 | rna-NM_001183511.1_MUCL30387 | cds-NP_014735.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:492077-493918:+ | gene-YOR092W_MUCL30388 | rna-NM_001183511.1_MUCL30388 | cds-NP_014735.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:482406-484247:+ | gene-YOR092W_MUCL39482 | rna-NM_001183511.1_MUCL39482 | cds-NP_014735.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:498229-500070:+ | gene-YOR092W_MUCL42920 | rna-NM_001183511.1_MUCL42920 | cds-NP_014735.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:495016-496857:+ | gene-YOR092W_NCIM3186 | rna-NM_001183511.1_NCIM3186 | cds-NP_014735.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:488587-490428:+ | gene-YOR092W_NCYC1407 | rna-NM_001183511.1_NCYC1407 | cds-NP_014735.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:487595-489436:+ | gene-YOR092W_PE2H3 | rna-NM_001183511.1_PE2H3 | cds-NP_014735.1_PE2H3 | 99.3 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:497971-499812:+ | gene-YOR092W_PE2H4 | rna-NM_001183511.1_PE2H4 | cds-NP_014735.1_PE2H4 | 99.3 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:495127-496968:+ | gene-YOR092W_S288C | rna-NM_001183511.1_S288C | cds-NP_014735.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000098.1:25842-27683:- | gene-YOR092W_SA1 | rna-NM_001183511.1_SA1 | cds-NP_014735.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:478672-480513:+ | gene-YOR092W_ThermosaccDry | rna-NM_001183511.1_ThermosaccDry | cds-NP_014735.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:480515-482356:+ | gene-YOR092W_VR1 | rna-NM_001183511.1_VR1 | cds-NP_014735.1_VR1 | 99.3 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:212666-214507:+ | gene-YOR092W_ZTW1 | rna-NM_001183511.1_ZTW1 | cds-NP_014735.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:484455-486296:+ | gene-YOR092W_Sparadoxus | rna-NM_001183511.1_Sparadoxus | cds-NP_014735.1_Sparadoxus | 90.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |