Gene name: ECM29
Reference locus (S288C): YHL030W
Gene biotype: protein_coding
Description: Proteasome component ECM29; Scaffold protein; assists in association of the proteasome core particle with the regulatory particle; inhibits proteasomal ATPase activity; degraded by the mature proteasome after assembly; contains HEAT-like repeats; protein increases in abundance and relocalizes from nucleus to cytoplasm upon DNA replication stress; Belongs to the ECM29 family
Top 10 interactors (score): RPN5 (0.999); RPN11 (0.999); RPN12 (0.998); RPT5 (0.998); RPT4 (0.998); RPN10 (0.998); RPT2 (0.996); RPN3 (0.996); RPN6 (0.996); RPN8 (0.995); RPN7 (0.994); RPN13 (0.994); RPT1 (0.994); RPT3 (0.993); RPT6 (0.993); RPN1 (0.992); RPN9 (0.99); RPN2 (0.987); BLM10 (0.981); UBP6 (0.979)
Homologues (species, bitscore): KIAA0368 (Homo sapiens, 410.2); AI314180 (Mus musculus, 399.4); LOC563777 (Danio rerio, 405.2); kiaa0368 (Xenopus tropicalis, 399.8); CG8858 (Drosophila melanogaster, 300.1); D2045.2 (Caenorhabditis elegans, 270.8); AT2G26780 (Arabidopsis thaliana, 337.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:34934-40540:+ | gene-YHL030W_AKU4011 | rna-NM_001179110.1_AKU4011 | cds-NP_011833.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000180.1:36226-41832:- | gene-YHL030W_BG1 | rna-NM_001179110.1_BG1 | cds-NP_011833.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:41593-47199:+ | gene-YHL030W_Bruggeman | rna-NM_001179110.1_Bruggeman | cds-NP_011833.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:35857-41463:+ | gene-YHL030W_CAT1 | rna-NM_001179110.1_CAT1 | cds-NP_011833.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:35538-41144:+ | gene-YHL030W_CBS1585 | rna-NM_001179110.1_CBS1585 | cds-NP_011833.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:28119-33725:+ | gene-YHL030W_CBS436 | rna-NM_001179110.1_CBS436 | cds-NP_011833.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:35486-41092:+ | gene-YHL030W_CBS6412 | rna-NM_001179110.1_CBS6412 | cds-NP_011833.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:34952-40558:+ | gene-YHL030W_CBS6413 | rna-NM_001179110.1_CBS6413 | cds-NP_011833.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:33245-38851:+ | gene-YHL030W_CENPK1137D | rna-NM_001179110.1_CENPK1137D | cds-NP_011833.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:35165-40771:+ | gene-YHL030W_EthanolRed | rna-NM_001179110.1_EthanolRed | cds-NP_011833.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:35489-41095:+ | gene-YHL030W_FaliES1 | rna-NM_001179110.1_FaliES1 | cds-NP_011833.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000003.1:4175-9781:+ | gene-YHL030W_JAY291 | rna-NM_001179110.1_JAY291 | cds-NP_011833.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:37429-43035:+ | gene-YHL030W_MUCL30387 | rna-NM_001179110.1_MUCL30387 | cds-NP_011833.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:39270-44876:+ | gene-YHL030W_MUCL30388 | rna-NM_001179110.1_MUCL30388 | cds-NP_011833.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:34529-40135:+ | gene-YHL030W_MUCL39482 | rna-NM_001179110.1_MUCL39482 | cds-NP_011833.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:38500-44106:+ | gene-YHL030W_MUCL42920 | rna-NM_001179110.1_MUCL42920 | cds-NP_011833.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:39966-45572:+ | gene-YHL030W_NCIM3186 | rna-NM_001179110.1_NCIM3186 | cds-NP_011833.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:34014-39620:+ | gene-YHL030W_NCYC1407 | rna-NM_001179110.1_NCYC1407 | cds-NP_011833.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:30305-35911:+ | gene-YHL030W_PE2H3 | rna-NM_001179110.1_PE2H3 | cds-NP_011833.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:37687-43293:+ | gene-YHL030W_PE2H4 | rna-NM_001179110.1_PE2H4 | cds-NP_011833.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:40084-45690:+ | gene-YHL030W_S288C | rna-NM_001179110.1_S288C | cds-NP_011833.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000005.1:24372-29978:+ | gene-YHL030W_SA1 | rna-NM_001179110.1_SA1 | cds-NP_011833.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:36578-42184:+ | gene-YHL030W_ThermosaccDry | rna-NM_001179110.1_ThermosaccDry | cds-NP_011833.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:41288-46894:+ | gene-YHL030W_VR1 | rna-NM_001179110.1_VR1 | cds-NP_011833.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:27788-33394:+ | gene-YHL030W_ZTW1 | rna-NM_001179110.1_ZTW1 | cds-NP_011833.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:34133-39739:+ | gene-YHL030W_Sparadoxus | rna-NM_001179110.1_Sparadoxus | cds-NP_011833.1_Sparadoxus | 88.9 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |