Gene name: ECM25
Reference locus (S288C): YJL201W
Gene biotype: protein_coding
Description: Protein ecm25; Non-essential protein of unknown function; promoter contains a consensus binding sequence for factor Abf1p
Top 10 interactors (score): RHO3 (0.955); RHO1 (0.955); RHO4 (0.955); RHO5 (0.955); CDC42 (0.955); RHO2 (0.955); GEM1 (0.939); TSC11 (0.848); LST8 (0.845); AVO1 (0.826); SLA1 (0.772); YLR125W (0.747); ERP3 (0.711); PUS9 (0.695); BZZ1 (0.644); TRM7 (0.62); ARF2 (0.613); ARF1 (0.613); REX3 (0.593); RGA2 (0.579)
Homologues (species, bitscore): crebbp (Xenopus tropicalis, 50.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:42781-44580:+ | gene-YJL201W_AKU4011 | rna-NM_001181634.1_AKU4011 | cds-NP_012334.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000181.1:20047-21846:+ | gene-YJL201W_BG1 | rna-NM_001181634.1_BG1 | cds-NP_012334.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:54581-56380:+ | gene-YJL201W_Bruggeman | rna-NM_001181634.1_Bruggeman | cds-NP_012334.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:57326-59125:+ | gene-YJL201W_CAT1 | rna-NM_001181634.1_CAT1 | cds-NP_012334.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:48411-50210:+ | gene-YJL201W_CBS1585 | rna-NM_001181634.1_CBS1585 | cds-NP_012334.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:73150-74949:+ | gene-YJL201W_CBS436 | rna-NM_001181634.1_CBS436 | cds-NP_012334.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:44894-46693:+ | gene-YJL201W_CBS6412 | rna-NM_001181634.1_CBS6412 | cds-NP_012334.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:45890-47689:+ | gene-YJL201W_CBS6413 | rna-NM_001181634.1_CBS6413 | cds-NP_012334.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:36840-38639:+ | gene-YJL201W_CENPK1137D | rna-NM_001181634.1_CENPK1137D | cds-NP_012334.1_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:47078-48877:+ | gene-YJL201W_EthanolRed | rna-NM_001181634.1_EthanolRed | cds-NP_012334.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:52355-54154:+ | gene-YJL201W_FaliES1 | rna-NM_001181634.1_FaliES1 | cds-NP_012334.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000301.1:43501-45300:+ | gene-YJL201W_JAY291 | rna-NM_001181634.1_JAY291 | cds-NP_012334.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:56314-58113:+ | gene-YJL201W_MUCL30387 | rna-NM_001181634.1_MUCL30387 | cds-NP_012334.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:52469-54268:+ | gene-YJL201W_MUCL30388 | rna-NM_001181634.1_MUCL30388 | cds-NP_012334.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:47152-48951:+ | gene-YJL201W_MUCL39482 | rna-NM_001181634.1_MUCL39482 | cds-NP_012334.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:51755-53554:+ | gene-YJL201W_MUCL42920 | rna-NM_001181634.1_MUCL42920 | cds-NP_012334.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:54358-56157:+ | gene-YJL201W_NCIM3186 | rna-NM_001181634.1_NCIM3186 | cds-NP_012334.1_NCIM3186 | 97.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:45767-47566:+ | gene-YJL201W_NCYC1407 | rna-NM_001181634.1_NCYC1407 | cds-NP_012334.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:58447-60246:+ | gene-YJL201W_PE2H3 | rna-NM_001181634.1_PE2H3 | cds-NP_012334.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:52335-54134:+ | gene-YJL201W_PE2H4 | rna-NM_001181634.1_PE2H4 | cds-NP_012334.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:54379-56178:+ | gene-YJL201W_S288C | rna-NM_001181634.1_S288C | cds-NP_012334.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000022.1:97716-99515:- | gene-YJL201W_SA1 | rna-NM_001181634.1_SA1 | cds-NP_012334.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:45550-47349:+ | gene-YJL201W_ThermosaccDry | rna-NM_001181634.1_ThermosaccDry | cds-NP_012334.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:52405-54204:+ | gene-YJL201W_VR1 | rna-NM_001181634.1_VR1 | cds-NP_012334.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:33129-34927:+ | gene-YJL201W_ZTW1 | rna-NM_001181634.1_ZTW1 | cds-NP_012334.1_ZTW1 | 99.6 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:57285-59081:+ | gene-YJL201W_Sparadoxus | rna-NM_001181634.1_Sparadoxus | cds-NP_012334.1_Sparadoxus | 91.1 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |