Gene name: ECM21
Reference locus (S288C): YBL101C
Gene biotype: protein_coding
Description: Arrestin-related trafficking adapter 2/8; Protein involved in regulating endocytosis of plasma membrane proteins; identified as a substrate for ubiquitination by Rsp5p and deubiquitination by Ubp2p; promoter contains several Gcn4p binding elements; ECM21 has a paralog, CSR2, that arose from the whole genome duplication
Top 10 interactors (score): RSP5 (0.958); LDB19 (0.926); ALY2 (0.893); ALY1 (0.891); ART10 (0.818); SMF1 (0.817); ROG3 (0.813); BUL2 (0.786); ROD1 (0.78); ART5 (0.78); BUL1 (0.759); RIM8 (0.748); SPO23 (0.745); YBR071W (0.651); YBL012C (0.651); PEP8 (0.634); YNR068C (0.61); YBL044W (0.572); ECM15 (0.57); YBL083C (0.566)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:24855-28208:- | gene-YBL101C_AKU4011 | rna-NM_001178341.1_AKU4011 | cds-NP_009449.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:15567-18920:- | gene-YBL101C_BG1 | rna-NM_001178341.1_BG1 | cds-NP_009449.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:25239-28592:- | gene-YBL101C_Bruggeman | rna-NM_001178341.1_Bruggeman | cds-NP_009449.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:27433-30786:- | gene-YBL101C_CAT1 | rna-NM_001178341.1_CAT1 | cds-NP_009449.1_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:16926-20279:- | gene-YBL101C_CBS1585 | rna-NM_001178341.1_CBS1585 | cds-NP_009449.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:19866-23229:- | gene-YBL101C_CBS436 | rna-NM_001178341.1_CBS436 | cds-NP_009449.1_CBS436 | 98.1 | 99.3 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:16714-20067:- | gene-YBL101C_CBS6412 | rna-NM_001178341.1_CBS6412 | cds-NP_009449.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:23056-26409:- | gene-YBL101C_CBS6413 | rna-NM_001178341.1_CBS6413 | cds-NP_009449.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:18877-22230:- | gene-YBL101C_CENPK1137D | rna-NM_001178341.1_CENPK1137D | cds-NP_009449.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:39098-42451:- | gene-YBL101C_EthanolRed | rna-NM_001178341.1_EthanolRed | cds-NP_009449.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:39230-42583:- | gene-YBL101C_FaliES1 | rna-NM_001178341.1_FaliES1 | cds-NP_009449.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000184.1:16260-19613:- | gene-YBL101C_JAY291 | rna-NM_001178341.1_JAY291 | cds-NP_009449.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:24370-27723:- | gene-YBL101C_MUCL30387 | rna-NM_001178341.1_MUCL30387 | cds-NP_009449.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:25276-28629:- | gene-YBL101C_MUCL30388 | rna-NM_001178341.1_MUCL30388 | cds-NP_009449.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:17082-20435:- | gene-YBL101C_MUCL39482 | rna-NM_001178341.1_MUCL39482 | cds-NP_009449.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:23722-27075:- | gene-YBL101C_MUCL42920 | rna-NM_001178341.1_MUCL42920 | cds-NP_009449.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:24743-28096:- | gene-YBL101C_NCIM3186 | rna-NM_001178341.1_NCIM3186 | cds-NP_009449.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:18754-22107:- | gene-YBL101C_NCYC1407 | rna-NM_001178341.1_NCYC1407 | cds-NP_009449.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:25050-28403:- | gene-YBL101C_PE2H3 | rna-NM_001178341.1_PE2H3 | cds-NP_009449.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:22682-26035:- | gene-YBL101C_PE2H4 | rna-NM_001178341.1_PE2H4 | cds-NP_009449.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:24946-28299:- | gene-YBL101C_S288C | rna-NM_001178341.1_S288C | cds-NP_009449.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000004.1:15365-18718:- | gene-YBL101C_SA1 | rna-NM_001178341.1_SA1 | cds-NP_009449.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:39192-42545:- | gene-YBL101C_ThermosaccDry | rna-NM_001178341.1_ThermosaccDry | cds-NP_009449.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:21395-24748:- | gene-YBL101C_VR1 | rna-NM_001178341.1_VR1 | cds-NP_009449.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:16417-19770:- | gene-YBL101C_ZTW1 | rna-NM_001178341.1_ZTW1 | cds-NP_009449.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:51357-54683:- | gene-YBL101C_Sparadoxus | rna-NM_001178341.1_Sparadoxus | cds-NP_009449.1_Sparadoxus | 89.4 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |