ECM19 (YLR390W)

Gene profile

Gene name: ECM19
Reference locus (S288C): YLR390W
Gene biotype: protein_coding

Description: Protein ecm19; Protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies

Top 10 interactors (score): PUF3 (0.763)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005306.1:852602-852940:+ gene-YLR390W_AKU4011 rna-NM_001182279.3_AKU4011 cds-NP_013494.3_AKU4011 99.7 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000048.1:84781-85119:+ gene-YLR390W_BG1 rna-NM_001182279.3_BG1 cds-NP_013494.3_BG1 98.8 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005514.1:890907-891245:+ gene-YLR390W_Bruggeman rna-NM_001182279.3_Bruggeman cds-NP_013494.3_Bruggeman 99.7 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005530.1:886434-886772:+ gene-YLR390W_CAT1 rna-NM_001182279.3_CAT1 cds-NP_013494.3_CAT1 99.1 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005370.1:888198-888536:+ gene-YLR390W_CBS1585 rna-NM_001182279.3_CBS1585 cds-NP_013494.3_CBS1585 99.7 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005354.1:871839-872177:+ gene-YLR390W_CBS436 rna-NM_001182279.3_CBS436 cds-NP_013494.3_CBS436 99.7 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005338.1:924239-924577:+ gene-YLR390W_CBS6412 rna-NM_001182279.3_CBS6412 cds-NP_013494.3_CBS6412 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005322.1:888489-888827:+ gene-YLR390W_CBS6413 rna-NM_001182279.3_CBS6413 cds-NP_013494.3_CBS6413 99.7 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001533.1:887877-888215:+ gene-YLR390W_CENPK1137D rna-NM_001182279.3_CENPK1137D cds-NP_013494.3_CENPK1137D 99.4 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005482.1:845145-845483:+ gene-YLR390W_EthanolRed rna-NM_001182279.3_EthanolRed cds-NP_013494.3_EthanolRed 100.0 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005546.1:874455-874793:+ gene-YLR390W_FaliES1 rna-NM_001182279.3_FaliES1 cds-NP_013494.3_FaliES1 100.0 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000434.1:27612-27950:+ gene-YLR390W_JAY291 rna-NM_001182279.3_JAY291 cds-NP_013494.3_JAY291 99.4 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005418.1:889773-890111:+ gene-YLR390W_MUCL30387 rna-NM_001182279.3_MUCL30387 cds-NP_013494.3_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005450.1:895859-896197:+ gene-YLR390W_MUCL30388 rna-NM_001182279.3_MUCL30388 cds-NP_013494.3_MUCL30388 100.0 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005290.1:889418-889756:+ gene-YLR390W_MUCL39482 rna-NM_001182279.3_MUCL39482 cds-NP_013494.3_MUCL39482 99.7 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005434.1:884074-884412:+ gene-YLR390W_MUCL42920 rna-NM_001182279.3_MUCL42920 cds-NP_013494.3_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011821.1:903040-903378:+ gene-YLR390W_NCIM3186 rna-NM_001182279.3_NCIM3186 cds-NP_013494.3_NCIM3186 100.0 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005274.1:898598-898936:+ gene-YLR390W_NCYC1407 rna-NM_001182279.3_NCYC1407 cds-NP_013494.3_NCYC1407 100.0 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994151.1:884992-885330:+ gene-YLR390W_PE2H3 rna-NM_001182279.3_PE2H3 cds-NP_013494.3_PE2H3 99.4 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999883.1:884736-885074:+ gene-YLR390W_PE2H4 rna-NM_001182279.3_PE2H4 cds-NP_013494.3_PE2H4 99.4 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001144.5:903066-903404:+ gene-YLR390W_S288C rna-NM_001182279.3_S288C cds-NP_013494.3_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000007.1:145284-145622:- gene-YLR390W_SA1 rna-NM_001182279.3_SA1 cds-NP_013494.3_SA1 99.7 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005498.1:877534-877872:+ gene-YLR390W_ThermosaccDry rna-NM_001182279.3_ThermosaccDry cds-NP_013494.3_ThermosaccDry 100.0 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005466.1:890082-890420:+ gene-YLR390W_VR1 rna-NM_001182279.3_VR1 cds-NP_013494.3_VR1 99.4 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000025.1:214250-214588:+ gene-YLR390W_ZTW1 rna-NM_001182279.3_ZTW1 cds-NP_013494.3_ZTW1 100.0 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047498.1:862960-863281:+ gene-YLR390W_Sparadoxus rna-NM_001182279.3_Sparadoxus cds-NP_013494.3_Sparadoxus 82.8 94.9 Unannotated 1 1 0 False False False True False

Additional files