Gene name: ECM18
Reference locus (S288C): YDR125C
Gene biotype: protein_coding
Description: Protein of unknown function; ECM18 has a paralog, ICT1, that arose from the whole genome duplication; Belongs to the peptidase S33 family. ABHD4/ABHD5 subfamily
Top 10 interactors (score): DAL5 (0.749); FUR4 (0.745); AI1 (0.697); GSF2 (0.691); ECM7 (0.678); PHB1 (0.577); PUF6 (0.558); PGC1 (0.536); YJU3 (0.528); DGA1 (0.495); MOH1 (0.487); FMP30 (0.476); PUF3 (0.471)
Homologues (species, bitscore): ABHD4 (Homo sapiens, 77.8); Abhd4 (Mus musculus, 76.6); abhd4 (Danio rerio, 82.4); abhd4 (Xenopus tropicalis, 75.9); CG1882 (Drosophila melanogaster, 50.4); C37H5.3 (Caenorhabditis elegans, 104.4); AT4G24160 (Arabidopsis thaliana, 103.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:672332-673693:- | gene-YDR125C_AKU4011 | rna-NM_001180433.3_AKU4011 | cds-NP_010410.3_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:451174-452535:+ | gene-YDR125C_BG1 | rna-NM_001180433.3_BG1 | cds-NP_010410.3_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:704393-705754:- | gene-YDR125C_Bruggeman | rna-NM_001180433.3_Bruggeman | cds-NP_010410.3_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:691145-692506:- | gene-YDR125C_CAT1 | rna-NM_001180433.3_CAT1 | cds-NP_010410.3_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:663370-664731:- | gene-YDR125C_CBS1585 | rna-NM_001180433.3_CBS1585 | cds-NP_010410.3_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:689260-690621:- | gene-YDR125C_CBS436 | rna-NM_001180433.3_CBS436 | cds-NP_010410.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:659722-661083:- | gene-YDR125C_CBS6412 | rna-NM_001180433.3_CBS6412 | cds-NP_010410.3_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:688698-690059:- | gene-YDR125C_CBS6413 | rna-NM_001180433.3_CBS6413 | cds-NP_010410.3_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:693837-695198:- | gene-YDR125C_CENPK1137D | rna-NM_001180433.3_CENPK1137D | cds-NP_010410.3_CENPK1137D | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:674095-675456:- | gene-YDR125C_EthanolRed | rna-NM_001180433.3_EthanolRed | cds-NP_010410.3_EthanolRed | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:680889-682250:- | gene-YDR125C_FaliES1 | rna-NM_001180433.3_FaliES1 | cds-NP_010410.3_FaliES1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000002.1:33020-34381:- | gene-YDR125C_JAY291 | rna-NM_001180433.3_JAY291 | cds-NP_010410.3_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:690317-691678:- | gene-YDR125C_MUCL30387 | rna-NM_001180433.3_MUCL30387 | cds-NP_010410.3_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:679336-680697:- | gene-YDR125C_MUCL30388 | rna-NM_001180433.3_MUCL30388 | cds-NP_010410.3_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:664713-666074:- | gene-YDR125C_MUCL39482 | rna-NM_001180433.3_MUCL39482 | cds-NP_010410.3_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:602664-604025:- | gene-YDR125C_MUCL42920 | rna-NM_001180433.3_MUCL42920 | cds-NP_010410.3_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:701320-702681:- | gene-YDR125C_NCIM3186 | rna-NM_001180433.3_NCIM3186 | cds-NP_010410.3_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:664116-665477:- | gene-YDR125C_NCYC1407 | rna-NM_001180433.3_NCYC1407 | cds-NP_010410.3_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:683448-684809:- | gene-YDR125C_PE2H3 | rna-NM_001180433.3_PE2H3 | cds-NP_010410.3_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:682753-684114:- | gene-YDR125C_PE2H4 | rna-NM_001180433.3_PE2H4 | cds-NP_010410.3_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:701397-702758:- | gene-YDR125C_S288C | rna-NM_001180433.3_S288C | cds-NP_010410.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000009.1:50064-51425:- | gene-YDR125C_SA1 | rna-NM_001180433.3_SA1 | cds-NP_010410.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:680411-681772:- | gene-YDR125C_ThermosaccDry | rna-NM_001180433.3_ThermosaccDry | cds-NP_010410.3_ThermosaccDry | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:693762-695123:- | gene-YDR125C_VR1 | rna-NM_001180433.3_VR1 | cds-NP_010410.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:677999-679359:- | gene-YDR125C_ZTW1 | rna-NM_001180433.3_ZTW1 | cds-NP_010410.3_ZTW1 | 99.1 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:682483-683846:- | gene-YDR125C_Sparadoxus | rna-NM_001180433.3_Sparadoxus | cds-NP_010410.3_Sparadoxus | 87.7 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |