Gene name: ECM13
Reference locus (S288C): YBL043W
Gene biotype: protein_coding
Description: Non-essential protein of unknown function; induced by treatment with 8-methoxypsoralen and UVA irradiation; ECM13 has a paralog, YJR115W, that arose from the whole genome duplication
Top 10 interactors (score): YBL010C (0.891); LDS1 (0.845); YMR230W-A (0.75); YBL044W (0.71); VID27 (0.671); YGR067C (0.644); POP8 (0.613); EPO1 (0.574); PRM10 (0.569); EFR3 (0.569); YPS5 (0.552); STP4 (0.549); MCH2 (0.526); PEX32 (0.526); NAB6 (0.525); FUI1 (0.499); RER2 (0.499); PBI1 (0.497); KIN2 (0.487); PRM3 (0.487)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:130301-131074:+ | gene-YBL043W_AKU4011 | rna-NM_001178283.1_AKU4011 | cds-NP_009510.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:121141-121914:+ | gene-YBL043W_BG1 | rna-NM_001178283.1_BG1 | cds-NP_009510.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:130906-131679:+ | gene-YBL043W_Bruggeman | rna-NM_001178283.1_Bruggeman | cds-NP_009510.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:133535-134308:+ | gene-YBL043W_CAT1 | rna-NM_001178283.1_CAT1 | cds-NP_009510.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:122838-123611:+ | gene-YBL043W_CBS1585 | rna-NM_001178283.1_CBS1585 | cds-NP_009510.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:131364-132137:+ | gene-YBL043W_CBS436 | rna-NM_001178283.1_CBS436 | cds-NP_009510.1_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:121004-121777:+ | gene-YBL043W_CBS6412 | rna-NM_001178283.1_CBS6412 | cds-NP_009510.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:128413-129186:+ | gene-YBL043W_CBS6413 | rna-NM_001178283.1_CBS6413 | cds-NP_009510.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:130460-131233:+ | gene-YBL043W_CENPK1137D | rna-NM_001178283.1_CENPK1137D | cds-NP_009510.1_CENPK1137D | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:144264-145037:+ | gene-YBL043W_EthanolRed | rna-NM_001178283.1_EthanolRed | cds-NP_009510.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:145119-145892:+ | gene-YBL043W_FaliES1 | rna-NM_001178283.1_FaliES1 | cds-NP_009510.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000072.1:47759-48532:+ | gene-YBL043W_JAY291 | rna-NM_001178283.1_JAY291 | cds-NP_009510.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:130282-131055:+ | gene-YBL043W_MUCL30387 | rna-NM_001178283.1_MUCL30387 | cds-NP_009510.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:131555-132328:+ | gene-YBL043W_MUCL30388 | rna-NM_001178283.1_MUCL30388 | cds-NP_009510.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:123018-123791:+ | gene-YBL043W_MUCL39482 | rna-NM_001178283.1_MUCL39482 | cds-NP_009510.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:129870-130643:+ | gene-YBL043W_MUCL42920 | rna-NM_001178283.1_MUCL42920 | cds-NP_009510.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:136485-137258:+ | gene-YBL043W_NCIM3186 | rna-NM_001178283.1_NCIM3186 | cds-NP_009510.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:124163-124936:+ | gene-YBL043W_NCYC1407 | rna-NM_001178283.1_NCYC1407 | cds-NP_009510.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:130435-131208:+ | gene-YBL043W_PE2H3 | rna-NM_001178283.1_PE2H3 | cds-NP_009510.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:128079-128852:+ | gene-YBL043W_PE2H4 | rna-NM_001178283.1_PE2H4 | cds-NP_009510.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:136688-137461:+ | gene-YBL043W_S288C | rna-NM_001178283.1_S288C | cds-NP_009510.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000051.1:21290-22063:+ | gene-YBL043W_SA1 | rna-NM_001178283.1_SA1 | cds-NP_009510.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:145080-145853:+ | gene-YBL043W_ThermosaccDry | rna-NM_001178283.1_ThermosaccDry | cds-NP_009510.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:127269-128042:+ | gene-YBL043W_VR1 | rna-NM_001178283.1_VR1 | cds-NP_009510.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:121787-122560:+ | gene-YBL043W_ZTW1 | rna-NM_001178283.1_ZTW1 | cds-NP_009510.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:156485-157276:+ | gene-YBL043W_Sparadoxus | rna-NM_001178283.1_Sparadoxus | cds-NP_009510.1_Sparadoxus | 86.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |