Gene name: ECI1
Reference locus (S288C): YLR284C
Gene biotype: protein_coding
Description: Peroxisomal delta3,delta2-enoyl-CoA isomerase; hexameric protein that converts 3-hexenoyl-CoA to trans-2-hexenoyl-CoA, essential for the beta-oxidation of unsaturated fatty acids, oleate-induced; ECI1 has a paralog, DCI1, that arose from the whole genome duplication
Top 10 interactors (score): FOX2 (0.998); POX1 (0.997); SPS19 (0.993); TES1 (0.99); POT1 (0.985); DCI1 (0.966); FAA2 (0.899); PXA1 (0.863); CAT2 (0.839); PXA2 (0.837); CTA1 (0.83); PEX11 (0.812); PEX5 (0.778); ERG10 (0.679); MDH3 (0.667); OLE1 (0.658); PEX8 (0.651); DUR1,2 (0.635); PCS60 (0.63); ADR1 (0.626)
Homologues (species, bitscore): CDYL (Homo sapiens, 79.3); Cdyl (Mus musculus, 77.4); zgc:92030 (Danio rerio, 95.5); eci2 (Xenopus tropicalis, 90.1); CG13890 (Drosophila melanogaster, 91.3); ech-4 (Caenorhabditis elegans, 91.3); DCI1 (Arabidopsis thaliana, 58.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:654995-655837:- | gene-YLR284C_AKU4011 | rna-NM_001182171.1_AKU4011 | cds-NP_013386.1_AKU4011 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000170.1:76795-77637:+ | gene-YLR284C_BG1 | rna-NM_001182171.1_BG1 | cds-NP_013386.1_BG1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:689984-690826:- | gene-YLR284C_Bruggeman | rna-NM_001182171.1_Bruggeman | cds-NP_013386.1_Bruggeman | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:688805-689647:- | gene-YLR284C_CAT1 | rna-NM_001182171.1_CAT1 | cds-NP_013386.1_CAT1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:689932-690774:- | gene-YLR284C_CBS1585 | rna-NM_001182171.1_CBS1585 | cds-NP_013386.1_CBS1585 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:674580-675422:- | gene-YLR284C_CBS436 | rna-NM_001182171.1_CBS436 | cds-NP_013386.1_CBS436 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:652566-653408:- | gene-YLR284C_CBS6412 | rna-NM_001182171.1_CBS6412 | cds-NP_013386.1_CBS6412 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:690596-691438:- | gene-YLR284C_CBS6413 | rna-NM_001182171.1_CBS6413 | cds-NP_013386.1_CBS6413 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:690797-691639:- | gene-YLR284C_CENPK1137D | rna-NM_001182171.1_CENPK1137D | cds-NP_013386.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:648305-649147:- | gene-YLR284C_EthanolRed | rna-NM_001182171.1_EthanolRed | cds-NP_013386.1_EthanolRed | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:677505-678347:- | gene-YLR284C_FaliES1 | rna-NM_001182171.1_FaliES1 | cds-NP_013386.1_FaliES1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000359.1:27397-28239:+ | gene-YLR284C_JAY291 | rna-NM_001182171.1_JAY291 | cds-NP_013386.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:690124-690966:- | gene-YLR284C_MUCL30387 | rna-NM_001182171.1_MUCL30387 | cds-NP_013386.1_MUCL30387 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:695457-696299:- | gene-YLR284C_MUCL30388 | rna-NM_001182171.1_MUCL30388 | cds-NP_013386.1_MUCL30388 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:691163-692005:- | gene-YLR284C_MUCL39482 | rna-NM_001182171.1_MUCL39482 | cds-NP_013386.1_MUCL39482 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:686373-687215:- | gene-YLR284C_MUCL42920 | rna-NM_001182171.1_MUCL42920 | cds-NP_013386.1_MUCL42920 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:706172-707014:- | gene-YLR284C_NCIM3186 | rna-NM_001182171.1_NCIM3186 | cds-NP_013386.1_NCIM3186 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:700495-701337:- | gene-YLR284C_NCYC1407 | rna-NM_001182171.1_NCYC1407 | cds-NP_013386.1_NCYC1407 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:688347-689189:- | gene-YLR284C_PE2H3 | rna-NM_001182171.1_PE2H3 | cds-NP_013386.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:688091-688933:- | gene-YLR284C_PE2H4 | rna-NM_001182171.1_PE2H4 | cds-NP_013386.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:706198-707040:- | gene-YLR284C_S288C | rna-NM_001182171.1_S288C | cds-NP_013386.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000039.1:77591-78433:+ | gene-YLR284C_SA1 | rna-NM_001182171.1_SA1 | cds-NP_013386.1_SA1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:679401-680243:- | gene-YLR284C_ThermosaccDry | rna-NM_001182171.1_ThermosaccDry | cds-NP_013386.1_ThermosaccDry | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:691298-692140:- | gene-YLR284C_VR1 | rna-NM_001182171.1_VR1 | cds-NP_013386.1_VR1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000025.1:17807-18649:- | gene-YLR284C_ZTW1 | rna-NM_001182171.1_ZTW1 | cds-NP_013386.1_ZTW1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:665492-666334:- | gene-YLR284C_Sparadoxus | rna-NM_001182171.1_Sparadoxus | cds-NP_013386.1_Sparadoxus | 87.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |