Gene name: EBS1
Reference locus (S288C): YDR206W
Gene biotype: protein_coding
Description: Protein involved in translation inhibition and nonsense-mediated decay; interacts with cap binding protein Cdc33p and with Nam7p; localizes to P-bodies upon glucose starvation; mRNA abundance regulated by mRNA decay factors; EBS1 has a paralog, EST1, that arose from the whole genome duplication
Top 10 interactors (score): NAM7 (0.992); EST2 (0.954); ECM32 (0.919); CBC2 (0.914); YDR274C (0.895); UPF3 (0.895); NMD2 (0.876); PAB1 (0.873); ESL1 (0.862); STO1 (0.854); XRN1 (0.835); ESL2 (0.821); SCD6 (0.787); DCP1 (0.746); CBF5 (0.737); TIF4632 (0.707); NMD4 (0.704); TOR1 (0.696); TIF4631 (0.694); TOR2 (0.685)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:830582-833236:+ | gene-YDR206W_AKU4011 | rna-NM_001180514.3_AKU4011 | cds-NP_010492.3_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:292578-295232:- | gene-YDR206W_BG1 | rna-NM_001180514.3_BG1 | cds-NP_010492.3_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:862995-865649:+ | gene-YDR206W_Bruggeman | rna-NM_001180514.3_Bruggeman | cds-NP_010492.3_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:850267-852921:+ | gene-YDR206W_CAT1 | rna-NM_001180514.3_CAT1 | cds-NP_010492.3_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:820942-823596:+ | gene-YDR206W_CBS1585 | rna-NM_001180514.3_CBS1585 | cds-NP_010492.3_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:849951-852605:+ | gene-YDR206W_CBS436 | rna-NM_001180514.3_CBS436 | cds-NP_010492.3_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:817749-820403:+ | gene-YDR206W_CBS6412 | rna-NM_001180514.3_CBS6412 | cds-NP_010492.3_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:848293-850947:+ | gene-YDR206W_CBS6413 | rna-NM_001180514.3_CBS6413 | cds-NP_010492.3_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:860886-863540:+ | gene-YDR206W_CENPK1137D | rna-NM_001180514.3_CENPK1137D | cds-NP_010492.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:831331-833985:+ | gene-YDR206W_EthanolRed | rna-NM_001180514.3_EthanolRed | cds-NP_010492.3_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:839543-842197:+ | gene-YDR206W_FaliES1 | rna-NM_001180514.3_FaliES1 | cds-NP_010492.3_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000068.1:7149-9803:- | gene-YDR206W_JAY291 | rna-NM_001180514.3_JAY291 | cds-NP_010492.3_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:848648-851302:+ | gene-YDR206W_MUCL30387 | rna-NM_001180514.3_MUCL30387 | cds-NP_010492.3_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:836897-839551:+ | gene-YDR206W_MUCL30388 | rna-NM_001180514.3_MUCL30388 | cds-NP_010492.3_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:822389-825043:+ | gene-YDR206W_MUCL39482 | rna-NM_001180514.3_MUCL39482 | cds-NP_010492.3_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:761095-763749:+ | gene-YDR206W_MUCL42920 | rna-NM_001180514.3_MUCL42920 | cds-NP_010492.3_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:861977-864631:+ | gene-YDR206W_NCIM3186 | rna-NM_001180514.3_NCIM3186 | cds-NP_010492.3_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:825523-828177:+ | gene-YDR206W_NCYC1407 | rna-NM_001180514.3_NCYC1407 | cds-NP_010492.3_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:842280-844934:+ | gene-YDR206W_PE2H3 | rna-NM_001180514.3_PE2H3 | cds-NP_010492.3_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:841579-844233:+ | gene-YDR206W_PE2H4 | rna-NM_001180514.3_PE2H4 | cds-NP_010492.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:862054-864708:+ | gene-YDR206W_S288C | rna-NM_001180514.3_S288C | cds-NP_010492.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000009.1:207758-210412:+ | gene-YDR206W_SA1 | rna-NM_001180514.3_SA1 | cds-NP_010492.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:837698-840352:+ | gene-YDR206W_ThermosaccDry | rna-NM_001180514.3_ThermosaccDry | cds-NP_010492.3_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:852927-855581:+ | gene-YDR206W_VR1 | rna-NM_001180514.3_VR1 | cds-NP_010492.3_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000007.1:100418-103072:+ | gene-YDR206W_ZTW1 | rna-NM_001180514.3_ZTW1 | cds-NP_010492.3_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:842620-845289:+ | gene-YDR206W_Sparadoxus | rna-NM_001180514.3_Sparadoxus | cds-NP_010492.3_Sparadoxus | 86.3 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |