Gene name: EAF3
Reference locus (S288C): YPR023C
Gene biotype: protein_coding
Description: Chromatin modification-related protein EAF3; Component of the Rpd3S histone deacetylase complex; Esa1p-associated factor, nonessential component of the NuA4 acetyltransferase complex, homologous to Drosophila dosage compensation protein MSL3; plays a role in regulating Ty1 transposition
Top 10 interactors (score): ESA1 (0.999); SIN3 (0.999); YAF9 (0.999); SWC4 (0.999); RCO1 (0.999); RPD3 (0.999); EPL1 (0.999); EAF7 (0.999); EAF6 (0.999); EAF5 (0.999); TRA1 (0.999); YNG2 (0.998); EAF1 (0.997); RVB2 (0.996); ARP4 (0.996); UME1 (0.996); PHO23 (0.995); RVB1 (0.994); SDS3 (0.992); HAT2 (0.992)
Homologues (species, bitscore): MORF4L1 (Homo sapiens, 132.5); Morf4l1 (Mus musculus, 132.5); morf4l1 (Danio rerio, 136.7); morf4l1 (Xenopus tropicalis, 135.2); MRG15 (Drosophila melanogaster, 149.1); mrg-1 (Caenorhabditis elegans, 54.3); AT4G37280 (Arabidopsis thaliana, 130.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:580464-581669:- | gene-YPR023C_AKU4011 | rna-NM_001184120.1_AKU4011 | cds-NP_015348.1_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:315480-316685:+ | gene-YPR023C_BG1 | rna-NM_001184120.1_BG1 | cds-NP_015348.1_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:658123-659328:- | gene-YPR023C_Bruggeman | rna-NM_001184120.1_Bruggeman | cds-NP_015348.1_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:701601-702806:- | gene-YPR023C_CAT1 | rna-NM_001184120.1_CAT1 | cds-NP_015348.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:584150-585355:- | gene-YPR023C_CBS1585 | rna-NM_001184120.1_CBS1585 | cds-NP_015348.1_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:598535-599740:- | gene-YPR023C_CBS436 | rna-NM_001184120.1_CBS436 | cds-NP_015348.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:587899-589104:- | gene-YPR023C_CBS6412 | rna-NM_001184120.1_CBS6412 | cds-NP_015348.1_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:580614-581819:- | gene-YPR023C_CBS6413 | rna-NM_001184120.1_CBS6413 | cds-NP_015348.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:608798-610003:- | gene-YPR023C_CENPK1137D | rna-NM_001184120.1_CENPK1137D | cds-NP_015348.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:578396-579601:- | gene-YPR023C_EthanolRed | rna-NM_001184120.1_EthanolRed | cds-NP_015348.1_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:586198-587403:- | gene-YPR023C_FaliES1 | rna-NM_001184120.1_FaliES1 | cds-NP_015348.1_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000116.1:40016-41221:+ | gene-YPR023C_JAY291 | rna-NM_001184120.1_JAY291 | cds-NP_015348.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:599343-600548:- | gene-YPR023C_MUCL30387 | rna-NM_001184120.1_MUCL30387 | cds-NP_015348.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:598007-599212:- | gene-YPR023C_MUCL30388 | rna-NM_001184120.1_MUCL30388 | cds-NP_015348.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:577406-578611:- | gene-YPR023C_MUCL39482 | rna-NM_001184120.1_MUCL39482 | cds-NP_015348.1_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:638720-639925:- | gene-YPR023C_MUCL42920 | rna-NM_001184120.1_MUCL42920 | cds-NP_015348.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:608809-610014:- | gene-YPR023C_NCIM3186 | rna-NM_001184120.1_NCIM3186 | cds-NP_015348.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:585337-586542:- | gene-YPR023C_NCYC1407 | rna-NM_001184120.1_NCYC1407 | cds-NP_015348.1_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:592053-593258:- | gene-YPR023C_PE2H3 | rna-NM_001184120.1_PE2H3 | cds-NP_015348.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:591701-592906:- | gene-YPR023C_PE2H4 | rna-NM_001184120.1_PE2H4 | cds-NP_015348.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:608826-610031:- | gene-YPR023C_S288C | rna-NM_001184120.1_S288C | cds-NP_015348.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000026.1:90284-91489:+ | gene-YPR023C_SA1 | rna-NM_001184120.1_SA1 | cds-NP_015348.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:586000-587205:- | gene-YPR023C_ThermosaccDry | rna-NM_001184120.1_ThermosaccDry | cds-NP_015348.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:602248-603453:- | gene-YPR023C_VR1 | rna-NM_001184120.1_VR1 | cds-NP_015348.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:585305-586510:- | gene-YPR023C_ZTW1 | rna-NM_001184120.1_ZTW1 | cds-NP_015348.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:585547-586752:- | gene-YPR023C_Sparadoxus | rna-NM_001184120.1_Sparadoxus | cds-NP_015348.1_Sparadoxus | 89.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |