Gene name: DUS1
Reference locus (S288C): YML080W
Gene biotype: protein_coding
Description: tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]; Dihydrouridine synthase; member of a widespread family of conserved proteins including Smm1p, Dus3p, and Dus4p; modifies pre-tRNA(Phe) at U17; Belongs to the Dus family. Dus1 subfamily
Top 10 interactors (score): TRM11 (0.987); GCD14 (0.976); DBP8 (0.962); TRM1 (0.943); YTM1 (0.941); TRM10 (0.927); NOG1 (0.913); UTP25 (0.912); UTP15 (0.912); GCD10 (0.912); SOF1 (0.912); RRP9 (0.91); TRM8 (0.909); RRS1 (0.906); UTP13 (0.906); NCL1 (0.905); TRM2 (0.905); UTP14 (0.903); LCP5 (0.884); SPB1 (0.882)
Homologues (species, bitscore): DUS1L (Homo sapiens, 303.5); Dus1l (Mus musculus, 298.1); dus1l (Danio rerio, 310.8); dus1l (Xenopus tropicalis, 304.7); CG3645 (Drosophila melanogaster, 324.3); F36A2.2 (Caenorhabditis elegans, 272.3); AT5G67220 (Arabidopsis thaliana, 250.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:102529-103800:+ | gene-YML080W_AKU4011 | rna-NM_001182439.1_AKU4011 | cds-NP_013631.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:372315-373586:- | gene-YML080W_BG1 | rna-NM_001182439.1_BG1 | cds-NP_013631.1_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:108695-109966:+ | gene-YML080W_Bruggeman | rna-NM_001182439.1_Bruggeman | cds-NP_013631.1_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:110372-111643:+ | gene-YML080W_CAT1 | rna-NM_001182439.1_CAT1 | cds-NP_013631.1_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:102536-103807:+ | gene-YML080W_CBS1585 | rna-NM_001182439.1_CBS1585 | cds-NP_013631.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:108463-109734:+ | gene-YML080W_CBS436 | rna-NM_001182439.1_CBS436 | cds-NP_013631.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:103246-104517:+ | gene-YML080W_CBS6412 | rna-NM_001182439.1_CBS6412 | cds-NP_013631.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:101719-102990:+ | gene-YML080W_CBS6413 | rna-NM_001182439.1_CBS6413 | cds-NP_013631.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:103513-104784:+ | gene-YML080W_CENPK1137D | rna-NM_001182439.1_CENPK1137D | cds-NP_013631.1_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:102804-104075:+ | gene-YML080W_EthanolRed | rna-NM_001182439.1_EthanolRed | cds-NP_013631.1_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:103313-104584:+ | gene-YML080W_FaliES1 | rna-NM_001182439.1_FaliES1 | cds-NP_013631.1_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000366.1:52506-53777:- | gene-YML080W_JAY291 | rna-NM_001182439.1_JAY291 | cds-NP_013631.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:107219-108490:+ | gene-YML080W_MUCL30387 | rna-NM_001182439.1_MUCL30387 | cds-NP_013631.1_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:110365-111636:+ | gene-YML080W_MUCL30388 | rna-NM_001182439.1_MUCL30388 | cds-NP_013631.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:102547-103818:+ | gene-YML080W_MUCL39482 | rna-NM_001182439.1_MUCL39482 | cds-NP_013631.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:107276-108547:+ | gene-YML080W_MUCL42920 | rna-NM_001182439.1_MUCL42920 | cds-NP_013631.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:108760-110031:+ | gene-YML080W_NCIM3186 | rna-NM_001182439.1_NCIM3186 | cds-NP_013631.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:103344-104615:+ | gene-YML080W_NCYC1407 | rna-NM_001182439.1_NCYC1407 | cds-NP_013631.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:108702-109973:+ | gene-YML080W_PE2H3 | rna-NM_001182439.1_PE2H3 | cds-NP_013631.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:108640-109911:+ | gene-YML080W_PE2H4 | rna-NM_001182439.1_PE2H4 | cds-NP_013631.1_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:108806-110077:+ | gene-YML080W_S288C | rna-NM_001182439.1_S288C | cds-NP_013631.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000041.1:74173-75444:- | gene-YML080W_SA1 | rna-NM_001182439.1_SA1 | cds-NP_013631.1_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:102605-103876:+ | gene-YML080W_ThermosaccDry | rna-NM_001182439.1_ThermosaccDry | cds-NP_013631.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:106991-108262:+ | gene-YML080W_VR1 | rna-NM_001182439.1_VR1 | cds-NP_013631.1_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:82139-83410:+ | gene-YML080W_ZTW1 | rna-NM_001182439.1_ZTW1 | cds-NP_013631.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:113314-114585:+ | gene-YML080W_Sparadoxus | rna-NM_001182439.1_Sparadoxus | cds-NP_013631.1_Sparadoxus | 89.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |