Gene name: DSS4
Reference locus (S288C): YPR017C
Gene biotype: protein_coding
Description: Protein DSS4; Guanine nucleotide dissociation stimulator for Sec4p; functions in the post-Golgi secretory pathway; binds zinc, found both on membranes and in the cytosol
Top 10 interactors (score): SEC4 (0.997); YPT1 (0.979); SEC2 (0.948); GYP1 (0.831); GYL1 (0.811); YGL177W (0.78); BET5 (0.778); SEC15 (0.757); YHR022C (0.731); YLR358C (0.714); GDI1 (0.7); SRO7 (0.698); TRS23 (0.662); MSS11 (0.65); MDR1 (0.644); SRP40 (0.619); IVY1 (0.618); MSB4 (0.609); MRS6 (0.608); SEC8 (0.574)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:565147-565578:- | gene-YPR017C_AKU4011 | rna-NM_001184114.1_AKU4011 | cds-NP_015342.1_AKU4011 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:331556-331987:+ | gene-YPR017C_BG1 | rna-NM_001184114.1_BG1 | cds-NP_015342.1_BG1 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:642808-643239:- | gene-YPR017C_Bruggeman | rna-NM_001184114.1_Bruggeman | cds-NP_015342.1_Bruggeman | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:686306-686737:- | gene-YPR017C_CAT1 | rna-NM_001184114.1_CAT1 | cds-NP_015342.1_CAT1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:568833-569264:- | gene-YPR017C_CBS1585 | rna-NM_001184114.1_CBS1585 | cds-NP_015342.1_CBS1585 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:583200-583631:- | gene-YPR017C_CBS436 | rna-NM_001184114.1_CBS436 | cds-NP_015342.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:572582-573013:- | gene-YPR017C_CBS6412 | rna-NM_001184114.1_CBS6412 | cds-NP_015342.1_CBS6412 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:565296-565727:- | gene-YPR017C_CBS6413 | rna-NM_001184114.1_CBS6413 | cds-NP_015342.1_CBS6413 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:593459-593890:- | gene-YPR017C_CENPK1137D | rna-NM_001184114.1_CENPK1137D | cds-NP_015342.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:563082-563513:- | gene-YPR017C_EthanolRed | rna-NM_001184114.1_EthanolRed | cds-NP_015342.1_EthanolRed | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:570884-571315:- | gene-YPR017C_FaliES1 | rna-NM_001184114.1_FaliES1 | cds-NP_015342.1_FaliES1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000116.1:56128-56559:+ | gene-YPR017C_JAY291 | rna-NM_001184114.1_JAY291 | cds-NP_015342.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:584028-584459:- | gene-YPR017C_MUCL30387 | rna-NM_001184114.1_MUCL30387 | cds-NP_015342.1_MUCL30387 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:582681-583112:- | gene-YPR017C_MUCL30388 | rna-NM_001184114.1_MUCL30388 | cds-NP_015342.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:562074-562505:- | gene-YPR017C_MUCL39482 | rna-NM_001184114.1_MUCL39482 | cds-NP_015342.1_MUCL39482 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:623405-623836:- | gene-YPR017C_MUCL42920 | rna-NM_001184114.1_MUCL42920 | cds-NP_015342.1_MUCL42920 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:593469-593900:- | gene-YPR017C_NCIM3186 | rna-NM_001184114.1_NCIM3186 | cds-NP_015342.1_NCIM3186 | 98.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:570021-570452:- | gene-YPR017C_NCYC1407 | rna-NM_001184114.1_NCYC1407 | cds-NP_015342.1_NCYC1407 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:576751-577182:- | gene-YPR017C_PE2H3 | rna-NM_001184114.1_PE2H3 | cds-NP_015342.1_PE2H3 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:576366-576797:- | gene-YPR017C_PE2H4 | rna-NM_001184114.1_PE2H4 | cds-NP_015342.1_PE2H4 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:593486-593917:- | gene-YPR017C_S288C | rna-NM_001184114.1_S288C | cds-NP_015342.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000026.1:106390-106821:+ | gene-YPR017C_SA1 | rna-NM_001184114.1_SA1 | cds-NP_015342.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:570683-571114:- | gene-YPR017C_ThermosaccDry | rna-NM_001184114.1_ThermosaccDry | cds-NP_015342.1_ThermosaccDry | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:586919-587350:- | gene-YPR017C_VR1 | rna-NM_001184114.1_VR1 | cds-NP_015342.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:569991-570422:- | gene-YPR017C_ZTW1 | rna-NM_001184114.1_ZTW1 | cds-NP_015342.1_ZTW1 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:570155-570585:- | gene-YPR017C_Sparadoxus | rna-NM_001184114.1_Sparadoxus | cds-NP_015342.1_Sparadoxus | 86.1 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |