Gene name: DSK2
Reference locus (S288C): YMR276W
Gene biotype: protein_coding
Description: Nuclear-enriched ubiquitin-like polyubiquitin-binding protein; required for spindle pole body (SPB) duplication and for transit through the G2/M phase of the cell cycle; involved in proteolysis; interacts with the proteasome; protein abundance increases in response to DNA replication stress
Top 10 interactors (score): UFD2 (0.999); RPN10 (0.999); RAD23 (0.999); RPN13 (0.999); RPN1 (0.996); ATG8 (0.996); UBI4 (0.996); DDI1 (0.994); CDC48 (0.994); RPN11 (0.986); RPT1 (0.977); UBP6 (0.97); RPN9 (0.952); RPL40B (0.947); UBA1 (0.931); UFD1 (0.922); NPL4 (0.919); RPS31 (0.918); PTH2 (0.915); RPN12 (0.902)
Homologues (species, bitscore): UBQLN1 (Homo sapiens, 102.8); Ubqln2 (Mus musculus, 104.0); ubqln4 (Danio rerio, 102.1); ubqln4 (Xenopus tropicalis, 99.4); Ubqn (Drosophila melanogaster, 78.6); ubql-1 (Caenorhabditis elegans, 102.8); AT2G17190 (Arabidopsis thaliana, 105.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:857908-859029:+ | gene-YMR276W_AKU4011 | rna-NM_001182783.1_AKU4011 | cds-NP_014003.1_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:94628-95749:- | gene-YMR276W_BG1 | rna-NM_001182783.1_BG1 | cds-NP_014003.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:803118-804239:+ | gene-YMR276W_Bruggeman | rna-NM_001182783.1_Bruggeman | cds-NP_014003.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:806404-807525:+ | gene-YMR276W_CAT1 | rna-NM_001182783.1_CAT1 | cds-NP_014003.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:790158-791279:+ | gene-YMR276W_CBS1585 | rna-NM_001182783.1_CBS1585 | cds-NP_014003.1_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:812463-813584:+ | gene-YMR276W_CBS436 | rna-NM_001182783.1_CBS436 | cds-NP_014003.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:901732-902853:+ | gene-YMR276W_CBS6412 | rna-NM_001182783.1_CBS6412 | cds-NP_014003.1_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:789279-790400:+ | gene-YMR276W_CBS6413 | rna-NM_001182783.1_CBS6413 | cds-NP_014003.1_CBS6413 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:813403-814524:+ | gene-YMR276W_CENPK1137D | rna-NM_001182783.1_CENPK1137D | cds-NP_014003.1_CENPK1137D | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:850598-851719:+ | gene-YMR276W_EthanolRed | rna-NM_001182783.1_EthanolRed | cds-NP_014003.1_EthanolRed | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:796625-797746:+ | gene-YMR276W_FaliES1 | rna-NM_001182783.1_FaliES1 | cds-NP_014003.1_FaliES1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000262.1:53997-55118:- | gene-YMR276W_JAY291 | rna-NM_001182783.1_JAY291 | cds-NP_014003.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:796943-798064:+ | gene-YMR276W_MUCL30387 | rna-NM_001182783.1_MUCL30387 | cds-NP_014003.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:806339-807460:+ | gene-YMR276W_MUCL30388 | rna-NM_001182783.1_MUCL30388 | cds-NP_014003.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:791246-792367:+ | gene-YMR276W_MUCL39482 | rna-NM_001182783.1_MUCL39482 | cds-NP_014003.1_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:799314-800435:+ | gene-YMR276W_MUCL42920 | rna-NM_001182783.1_MUCL42920 | cds-NP_014003.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:818781-819902:+ | gene-YMR276W_NCIM3186 | rna-NM_001182783.1_NCIM3186 | cds-NP_014003.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:790889-792010:+ | gene-YMR276W_NCYC1407 | rna-NM_001182783.1_NCYC1407 | cds-NP_014003.1_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:806684-807805:+ | gene-YMR276W_PE2H3 | rna-NM_001182783.1_PE2H3 | cds-NP_014003.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:802670-803791:+ | gene-YMR276W_PE2H4 | rna-NM_001182783.1_PE2H4 | cds-NP_014003.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:818827-819948:+ | gene-YMR276W_S288C | rna-NM_001182783.1_S288C | cds-NP_014003.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000114.1:10650-11771:+ | gene-YMR276W_SA1 | rna-NM_001182783.1_SA1 | cds-NP_014003.1_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:792794-793915:+ | gene-YMR276W_ThermosaccDry | rna-NM_001182783.1_ThermosaccDry | cds-NP_014003.1_ThermosaccDry | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:806038-807159:+ | gene-YMR276W_VR1 | rna-NM_001182783.1_VR1 | cds-NP_014003.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000028.1:208023-209144:+ | gene-YMR276W_ZTW1 | rna-NM_001182783.1_ZTW1 | cds-NP_014003.1_ZTW1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:811232-812365:+ | gene-YMR276W_Sparadoxus | rna-NM_001182783.1_Sparadoxus | cds-NP_014003.1_Sparadoxus | 90.5 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |