Gene name: DSD1
Reference locus (S288C): YGL196W
Gene biotype: protein_coding
Description: D-serine dehydratase (aka D-serine ammonia-lyase); converts D-serine to pyruvate and ammonia by a reaction dependent on pyridoxal 5'-phosphate and zinc; may play a role in D-serine detoxification; L-serine is not a substrate
Top 10 interactors (score): CHA1 (0.912); ILV1 (0.912); SNO4 (0.8); HSP31 (0.8); GRE2 (0.8); HSP32 (0.8); GLO1 (0.8); HSP33 (0.8); YDR132C (0.691); YGL242C (0.691); YDL109C (0.676); MPO1 (0.671); YCR101C (0.671); POF1 (0.652); YLR108C (0.619); VPS55 (0.618); OCA5 (0.612); OCA1 (0.597); TDA5 (0.578); RDS1 (0.575)
Homologues (species, bitscore): zgc:162816 (Danio rerio, 149.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:132419-133705:+ | gene-YGL196W_AKU4011 | rna-NM_001181061.1_AKU4011 | cds-NP_011319.2_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000132.1:276715-278001:- | gene-YGL196W_BG1 | rna-NM_001181061.1_BG1 | cds-NP_011319.2_BG1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:133461-134747:+ | gene-YGL196W_Bruggeman | rna-NM_001181061.1_Bruggeman | cds-NP_011319.2_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:130276-131562:+ | gene-YGL196W_CAT1 | rna-NM_001181061.1_CAT1 | cds-NP_011319.2_CAT1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:135564-136850:+ | gene-YGL196W_CBS1585 | rna-NM_001181061.1_CBS1585 | cds-NP_011319.2_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:130539-131825:+ | gene-YGL196W_CBS436 | rna-NM_001181061.1_CBS436 | cds-NP_011319.2_CBS436 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:122334-123620:+ | gene-YGL196W_CBS6412 | rna-NM_001181061.1_CBS6412 | cds-NP_011319.2_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:129869-131155:+ | gene-YGL196W_CBS6413 | rna-NM_001181061.1_CBS6413 | cds-NP_011319.2_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:130062-131348:+ | gene-YGL196W_CENPK1137D | rna-NM_001181061.1_CENPK1137D | cds-NP_011319.2_CENPK1137D | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:122401-123687:+ | gene-YGL196W_EthanolRed | rna-NM_001181061.1_EthanolRed | cds-NP_011319.2_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:123403-124689:+ | gene-YGL196W_FaliES1 | rna-NM_001181061.1_FaliES1 | cds-NP_011319.2_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000397.1:48716-50002:+ | gene-YGL196W_JAY291 | rna-NM_001181061.1_JAY291 | cds-NP_011319.2_JAY291 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:131898-133184:+ | gene-YGL196W_MUCL30387 | rna-NM_001181061.1_MUCL30387 | cds-NP_011319.2_MUCL30387 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:134236-135522:+ | gene-YGL196W_MUCL30388 | rna-NM_001181061.1_MUCL30388 | cds-NP_011319.2_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:132565-133851:+ | gene-YGL196W_MUCL39482 | rna-NM_001181061.1_MUCL39482 | cds-NP_011319.2_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:135179-136465:+ | gene-YGL196W_MUCL42920 | rna-NM_001181061.1_MUCL42920 | cds-NP_011319.2_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:129883-131169:+ | gene-YGL196W_NCIM3186 | rna-NM_001181061.1_NCIM3186 | cds-NP_011319.2_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:124049-125335:+ | gene-YGL196W_NCYC1407 | rna-NM_001181061.1_NCYC1407 | cds-NP_011319.2_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:126044-127330:+ | gene-YGL196W_PE2H3 | rna-NM_001181061.1_PE2H3 | cds-NP_011319.2_PE2H3 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:125592-126878:+ | gene-YGL196W_PE2H4 | rna-NM_001181061.1_PE2H4 | cds-NP_011319.2_PE2H4 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:129883-131169:+ | gene-YGL196W_S288C | rna-NM_001181061.1_S288C | cds-NP_011319.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000002.1:244336-245622:- | gene-YGL196W_SA1 | rna-NM_001181061.1_SA1 | cds-NP_011319.2_SA1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:123663-124949:+ | gene-YGL196W_ThermosaccDry | rna-NM_001181061.1_ThermosaccDry | cds-NP_011319.2_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:130951-132237:+ | gene-YGL196W_VR1 | rna-NM_001181061.1_VR1 | cds-NP_011319.2_VR1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:122200-123486:+ | gene-YGL196W_ZTW1 | rna-NM_001181061.1_ZTW1 | cds-NP_011319.2_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:129092-130378:+ | gene-YGL196W_Sparadoxus | rna-NM_001181061.1_Sparadoxus | cds-NP_011319.2_Sparadoxus | 89.0 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |