DRE2 (YKR071C)


Gene profile

Gene name: DRE2
Reference locus (S288C): YKR071C
Gene biotype: protein_coding

Description: Component of the cytosolic Fe-S protein assembly (CIA) machinery; contains an Fe-S cluster that receives electrons from NADPH via the action of Tah18p in an early step in the CIA pathway; ortholog of human Ciapin1; protein abundance increases in response to DNA replication stress; inviability of the null mutant is functionally complemented by human CIAPIN1; Belongs to the anamorsin family

Top 10 interactors (score): TAH18 (0.999); NBP35 (0.999); GRX3 (0.998); CFD1 (0.997); GRX4 (0.996); NAR1 (0.994); BOL1 (0.992); GRX5 (0.992); MET18 (0.99); BOL2 (0.984); BOL3 (0.975); ATM1 (0.953); CIA2 (0.949); RLI1 (0.946); MIA40 (0.939); ISD11 (0.908); CIA1 (0.899); IBA57 (0.899); JAC1 (0.893); YAH1 (0.889)

Homologues (species, bitscore): CIAPIN1 (Homo sapiens, 85.5); Ciapin1 (Mus musculus, 87.0); ciapin1 (Danio rerio, 82.4); ciapin1 (Xenopus tropicalis, 88.6); CIAPIN1 (Drosophila melanogaster, 84.0); T20B12.7 (Caenorhabditis elegans, 80.5); AT5G18400 (Arabidopsis thaliana, 70.9)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005305.1:560979-562025:- gene-YKR071C_AKU4011 rna-NM_001179861.3_AKU4011 cds-NP_012997.3_AKU4011 100.0 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000113.1:82252-83298:+ gene-YKR071C_BG1 rna-NM_001179861.3_BG1 cds-NP_012997.3_BG1 99.1 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005513.1:582417-583463:- gene-YKR071C_Bruggeman rna-NM_001179861.3_Bruggeman cds-NP_012997.3_Bruggeman 99.2 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005529.1:578824-579870:- gene-YKR071C_CAT1 rna-NM_001179861.3_CAT1 cds-NP_012997.3_CAT1 99.2 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005369.1:573472-574518:- gene-YKR071C_CBS1585 rna-NM_001179861.3_CBS1585 cds-NP_012997.3_CBS1585 99.7 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005353.1:571800-572846:- gene-YKR071C_CBS436 rna-NM_001179861.3_CBS436 cds-NP_012997.3_CBS436 99.0 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005337.1:556760-557806:- gene-YKR071C_CBS6412 rna-NM_001179861.3_CBS6412 cds-NP_012997.3_CBS6412 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005321.1:573290-574336:- gene-YKR071C_CBS6413 rna-NM_001179861.3_CBS6413 cds-NP_012997.3_CBS6413 100.0 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001532.1:574600-575646:- gene-YKR071C_CENPK1137D rna-NM_001179861.3_CENPK1137D cds-NP_012997.3_CENPK1137D 99.3 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005481.1:570289-571335:- gene-YKR071C_EthanolRed rna-NM_001179861.3_EthanolRed cds-NP_012997.3_EthanolRed 100.0 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005545.1:574189-575235:- gene-YKR071C_FaliES1 rna-NM_001179861.3_FaliES1 cds-NP_012997.3_FaliES1 100.0 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000410.1:3003-4049:+ gene-YKR071C_JAY291 rna-NM_001179861.3_JAY291 cds-NP_012997.3_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005417.1:582801-583847:- gene-YKR071C_MUCL30387 rna-NM_001179861.3_MUCL30387 cds-NP_012997.3_MUCL30387 99.1 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005449.1:577401-578447:- gene-YKR071C_MUCL30388 rna-NM_001179861.3_MUCL30388 cds-NP_012997.3_MUCL30388 99.0 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005289.1:572301-573347:- gene-YKR071C_MUCL39482 rna-NM_001179861.3_MUCL39482 cds-NP_012997.3_MUCL39482 99.6 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005433.1:578324-579370:- gene-YKR071C_MUCL42920 rna-NM_001179861.3_MUCL42920 cds-NP_012997.3_MUCL42920 99.0 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011820.1:574923-575969:- gene-YKR071C_NCIM3186 rna-NM_001179861.3_NCIM3186 cds-NP_012997.3_NCIM3186 98.8 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005273.1:572722-573768:- gene-YKR071C_NCYC1407 rna-NM_001179861.3_NCYC1407 cds-NP_012997.3_NCYC1407 100.0 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994150.1:597878-598924:- gene-YKR071C_PE2H3 rna-NM_001179861.3_PE2H3 cds-NP_012997.3_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999882.1:582262-583308:- gene-YKR071C_PE2H4 rna-NM_001179861.3_PE2H4 cds-NP_012997.3_PE2H4 99.1 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001143.9:574934-575980:- gene-YKR071C_S288C rna-NM_001179861.3_S288C cds-NP_012997.3_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000029.1:105865-106911:+ gene-YKR071C_SA1 rna-NM_001179861.3_SA1 cds-NP_012997.3_SA1 99.6 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005497.1:573428-574474:- gene-YKR071C_ThermosaccDry rna-NM_001179861.3_ThermosaccDry cds-NP_012997.3_ThermosaccDry 100.0 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005465.1:573188-574234:- gene-YKR071C_VR1 rna-NM_001179861.3_VR1 cds-NP_012997.3_VR1 99.7 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000022.1:570916-571962:- gene-YKR071C_ZTW1 rna-NM_001179861.3_ZTW1 cds-NP_012997.3_ZTW1 100.0 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047497.1:596322-597368:- gene-YKR071C_Sparadoxus rna-NM_001179861.3_Sparadoxus cds-NP_012997.3_Sparadoxus 86.7 99.7 Verified 1 1 1 False True False False False

Additional files