DOS2 (YDR068W)


Gene profile

Gene name: DOS2
Reference locus (S288C): YDR068W
Gene biotype: protein_coding

Description: Protein dos2; Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm

Top 10 interactors (score): YGR259C (0.919); YNR063W (0.913); YER134C (0.91); J1120 (0.843); OCA6 (0.808); YPL062W (0.779); VBA5 (0.779); RTR2 (0.77); ROX1 (0.746); YOR292C (0.745); MRPL24 (0.714); MEF1 (0.673); TFB4 (0.67); PDX3 (0.661); RPC53 (0.647); PET100 (0.645); RRG1 (0.641); TFB5 (0.62); LCL1 (0.617); FMP52 (0.604)

Homologues (species, bitscore): BSDC1 (Homo sapiens, 64.7); Bsdc1 (Mus musculus, 64.3); bsdc1 (Danio rerio, 50.8); bsdc1 (Xenopus tropicalis, 55.8); AT1G03350 (Arabidopsis thaliana, 52.4)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005298.1:561256-562200:+ gene-YDR068W_AKU4011 rna-NM_001180376.3_AKU4011 cds-NP_010353.3_AKU4011 97.4 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000080.1:563212-564137:- gene-YDR068W_BG1 rna-NM_001180376.3_BG1 cds-NP_010353.3_BG1 97.8 99.2 Verified 1 1 0 False False False True False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005506.1:593558-594499:+ gene-YDR068W_Bruggeman rna-NM_001180376.3_Bruggeman cds-NP_010353.3_Bruggeman 97.7 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005522.1:577141-578082:+ gene-YDR068W_CAT1 rna-NM_001180376.3_CAT1 cds-NP_010353.3_CAT1 98.5 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005362.1:552209-553153:+ gene-YDR068W_CBS1585 rna-NM_001180376.3_CBS1585 cds-NP_010353.3_CBS1585 97.3 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005346.1:577372-578297:+ gene-YDR068W_CBS436 rna-NM_001180376.3_CBS436 cds-NP_010353.3_CBS436 97.8 99.2 Mismatch 1 1 0 False False False True False
CBS6412 GCA_001738345.1 Sake Asia CM005330.1:548621-549565:+ gene-YDR068W_CBS6412 rna-NM_001180376.3_CBS6412 cds-NP_010353.3_CBS6412 97.4 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005314.1:577287-578231:+ gene-YDR068W_CBS6413 rna-NM_001180376.3_CBS6413 cds-NP_010353.3_CBS6413 97.4 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001525.1:582677-583602:+ gene-YDR068W_CENPK1137D rna-NM_001180376.3_CENPK1137D cds-NP_010353.3_CENPK1137D 97.8 99.2 Verified 1 1 0 False False False True False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005474.1:563073-564014:+ gene-YDR068W_EthanolRed rna-NM_001180376.3_EthanolRed cds-NP_010353.3_EthanolRed 97.6 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005538.1:569520-570461:+ gene-YDR068W_FaliES1 rna-NM_001180376.3_FaliES1 cds-NP_010353.3_FaliES1 97.7 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000358.1:60363-61288:- gene-YDR068W_JAY291 rna-NM_001180376.3_JAY291 cds-NP_010353.3_JAY291 97.8 99.2 Verified 1 1 0 False False False True False
MUCL30387 GCA_001738515.1 Bread Europe CM005410.1:578251-579192:+ gene-YDR068W_MUCL30387 rna-NM_001180376.3_MUCL30387 cds-NP_010353.3_MUCL30387 97.7 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005442.1:568641-569582:+ gene-YDR068W_MUCL30388 rna-NM_001180376.3_MUCL30388 cds-NP_010353.3_MUCL30388 97.7 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005282.1:553580-554524:+ gene-YDR068W_MUCL39482 rna-NM_001180376.3_MUCL39482 cds-NP_010353.3_MUCL39482 97.3 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005426.1:484052-484993:+ gene-YDR068W_MUCL42920 rna-NM_001180376.3_MUCL42920 cds-NP_010353.3_MUCL42920 97.6 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011813.1:583636-584568:+ gene-YDR068W_NCIM3186 rna-NM_001180376.3_NCIM3186 cds-NP_010353.3_NCIM3186 98.1 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005266.1:552512-553456:+ gene-YDR068W_NCYC1407 rna-NM_001180376.3_NCYC1407 cds-NP_010353.3_NCYC1407 97.4 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994143.1:572147-573072:+ gene-YDR068W_PE2H3 rna-NM_001180376.3_PE2H3 cds-NP_010353.3_PE2H3 98.6 99.2 Verified 1 1 0 False False False True False
PE2H4 GCA_905220315.1 Bioethanol South America LR999875.1:571452-572377:+ gene-YDR068W_PE2H4 rna-NM_001180376.3_PE2H4 cds-NP_010353.3_PE2H4 98.6 99.2 Verified 1 1 0 False False False True False
S288C GCF_000146045.2 Laboratory Not applicable NC_001136.10:583713-584645:+ gene-YDR068W_S288C rna-NM_001180376.3_S288C cds-NP_010353.3_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000011.1:60855-61780:- gene-YDR068W_SA1 rna-NM_001180376.3_SA1 cds-NP_010353.3_SA1 97.8 99.2 Verified 1 1 0 False False False True False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005490.1:569212-570153:+ gene-YDR068W_ThermosaccDry rna-NM_001180376.3_ThermosaccDry cds-NP_010353.3_ThermosaccDry 97.7 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005458.1:581943-582868:+ gene-YDR068W_VR1 rna-NM_001180376.3_VR1 cds-NP_010353.3_VR1 98.6 99.2 Verified 1 1 0 False False False True False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000006.1:566860-567801:+ gene-YDR068W_ZTW1 rna-NM_001180376.3_ZTW1 cds-NP_010353.3_ZTW1 97.7 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047490.1:571756-572675:+ gene-YDR068W_Sparadoxus rna-NM_001180376.3_Sparadoxus cds-NP_010353.3_Sparadoxus 85.1 98.6 Verified 1 1 0 False False False True False

Additional files