Gene name: DOC1
Reference locus (S288C): YGL240W
Gene biotype: protein_coding
Description: Anaphase-promoting complex subunit DOC1; Processivity factor; required for the ubiquitination activity of the anaphase promoting complex (APC), mediates the activity of the APC by contributing to substrate recognition; involved in cyclin proteolysis; contains a conserved DOC1 homology domain; Belongs to the APC10 family
Top 10 interactors (score): APC5 (0.999); APC11 (0.999); APC2 (0.999); CDC26 (0.999); CDC16 (0.999); APC1 (0.999); APC4 (0.999); SWM1 (0.999); CDC23 (0.999); APC9 (0.999); CDC27 (0.999); MND2 (0.999); CDH1 (0.998); MAD2 (0.997); CDC20 (0.996); MAD3 (0.993); BUB1 (0.987); AMA1 (0.984); BUB3 (0.97); UBC11 (0.941)
Homologues (species, bitscore): ANAPC10 (Homo sapiens, 103.6); Anapc10 (Mus musculus, 104.0); anapc10 (Danio rerio, 102.1); anapc10 (Xenopus tropicalis, 99.8); APC10 (Drosophila melanogaster, 91.7); Y48G1C.12 (Caenorhabditis elegans, 91.3); APC10 (Arabidopsis thaliana, 99.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:50146-50898:+ | gene-YGL240W_AKU4011 | rna-NM_001181106.1_AKU4011 | cds-NP_011274.2_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000175.1:42178-42930:+ | gene-YGL240W_BG1 | rna-NM_001181106.1_BG1 | cds-NP_011274.2_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:50494-51246:+ | gene-YGL240W_Bruggeman | rna-NM_001181106.1_Bruggeman | cds-NP_011274.2_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:48565-49317:+ | gene-YGL240W_CAT1 | rna-NM_001181106.1_CAT1 | cds-NP_011274.2_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:54434-55186:+ | gene-YGL240W_CBS1585 | rna-NM_001181106.1_CBS1585 | cds-NP_011274.2_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:49155-49907:+ | gene-YGL240W_CBS436 | rna-NM_001181106.1_CBS436 | cds-NP_011274.2_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:42003-42755:+ | gene-YGL240W_CBS6412 | rna-NM_001181106.1_CBS6412 | cds-NP_011274.2_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:48290-49042:+ | gene-YGL240W_CBS6413 | rna-NM_001181106.1_CBS6413 | cds-NP_011274.2_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:48274-49026:+ | gene-YGL240W_CENPK1137D | rna-NM_001181106.1_CENPK1137D | cds-NP_011274.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:41234-41986:+ | gene-YGL240W_EthanolRed | rna-NM_001181106.1_EthanolRed | cds-NP_011274.2_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:41819-42571:+ | gene-YGL240W_FaliES1 | rna-NM_001181106.1_FaliES1 | cds-NP_011274.2_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000079.1:24552-25304:- | gene-YGL240W_JAY291 | rna-NM_001181106.1_JAY291 | cds-NP_011274.2_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:50432-51184:+ | gene-YGL240W_MUCL30387 | rna-NM_001181106.1_MUCL30387 | cds-NP_011274.2_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:52584-53336:+ | gene-YGL240W_MUCL30388 | rna-NM_001181106.1_MUCL30388 | cds-NP_011274.2_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:51031-51783:+ | gene-YGL240W_MUCL39482 | rna-NM_001181106.1_MUCL39482 | cds-NP_011274.2_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:53917-54669:+ | gene-YGL240W_MUCL42920 | rna-NM_001181106.1_MUCL42920 | cds-NP_011274.2_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:48613-49365:+ | gene-YGL240W_NCIM3186 | rna-NM_001181106.1_NCIM3186 | cds-NP_011274.2_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:42791-43543:+ | gene-YGL240W_NCYC1407 | rna-NM_001181106.1_NCYC1407 | cds-NP_011274.2_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:44644-45396:+ | gene-YGL240W_PE2H3 | rna-NM_001181106.1_PE2H3 | cds-NP_011274.2_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:44192-44944:+ | gene-YGL240W_PE2H4 | rna-NM_001181106.1_PE2H4 | cds-NP_011274.2_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:48613-49365:+ | gene-YGL240W_S288C | rna-NM_001181106.1_S288C | cds-NP_011274.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000002.1:325968-326720:- | gene-YGL240W_SA1 | rna-NM_001181106.1_SA1 | cds-NP_011274.2_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:42125-42877:+ | gene-YGL240W_ThermosaccDry | rna-NM_001181106.1_ThermosaccDry | cds-NP_011274.2_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:49080-49832:+ | gene-YGL240W_VR1 | rna-NM_001181106.1_VR1 | cds-NP_011274.2_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:41170-41922:+ | gene-YGL240W_ZTW1 | rna-NM_001181106.1_ZTW1 | cds-NP_011274.2_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:49865-50617:+ | gene-YGL240W_Sparadoxus | rna-NM_001181106.1_Sparadoxus | cds-NP_011274.2_Sparadoxus | 88.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |