Gene name: DMC1
Reference locus (S288C): YER179W
Gene biotype: protein_coding
Description: Meiotic recombination protein DMC1; Meiosis-specific recombinase required for double-strand break repair; also required for pairing between homologous chromosomes; required for the normal morphogenesis of synaptonemal complex; homolog of Rad51p and the bacterial RecA protein; binds ssDNA and dsDNA, forms helical filaments; stimulated by Rdh54p; Belongs to the RecA family. DMC1 subfamily
Top 10 interactors (score): SPO11 (0.998); RAD51 (0.993); RAD54 (0.991); HOP2 (0.987); RDH54 (0.984); PCH2 (0.982); RAD57 (0.98); MUS81 (0.974); HOP1 (0.974); MND1 (0.973); MSH4 (0.972); MEK1 (0.971); MLH1 (0.959); RAD52 (0.928); MSH5 (0.922); NDT80 (0.921); MEC1 (0.919); SGS1 (0.919); RFA1 (0.914); SAE3 (0.898)
Homologues (species, bitscore): DMC1 (Homo sapiens, 369.0); Dmc1 (Mus musculus, 372.1); dmc1 (Danio rerio, 370.9); rad51 (Xenopus tropicalis, 317.4); spn-A (Drosophila melanogaster, 303.1); rad-51 (Caenorhabditis elegans, 312.4); DMC1 (Arabidopsis thaliana, 349.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:529935-531031:+ | gene-YER179W_AKU4011 | rna-NM_001179069.1_AKU4011 | cds-NP_011106.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000176.1:2339-3435:- | gene-YER179W_BG1 | rna-NM_001179069.1_BG1 | cds-NP_011106.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:542681-543777:+ | gene-YER179W_Bruggeman | rna-NM_001179069.1_Bruggeman | cds-NP_011106.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:529269-530365:+ | gene-YER179W_CAT1 | rna-NM_001179069.1_CAT1 | cds-NP_011106.1_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:529739-530835:+ | gene-YER179W_CBS1585 | rna-NM_001179069.1_CBS1585 | cds-NP_011106.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:539630-540726:+ | gene-YER179W_CBS436 | rna-NM_001179069.1_CBS436 | cds-NP_011106.1_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:527716-528812:+ | gene-YER179W_CBS6412 | rna-NM_001179069.1_CBS6412 | cds-NP_011106.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:536285-537381:+ | gene-YER179W_CBS6413 | rna-NM_001179069.1_CBS6413 | cds-NP_011106.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:546186-547282:+ | gene-YER179W_CENPK1137D | rna-NM_001179069.1_CENPK1137D | cds-NP_011106.1_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:535902-536998:+ | gene-YER179W_EthanolRed | rna-NM_001179069.1_EthanolRed | cds-NP_011106.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:536838-537934:+ | gene-YER179W_FaliES1 | rna-NM_001179069.1_FaliES1 | cds-NP_011106.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000169.1:1964-3059:- | gene-YER179W_JAY291 | rna-NM_001179069.1_JAY291 | cds-NP_011106.1_JAY291 | 99.2 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:529991-531087:+ | gene-YER179W_MUCL30387 | rna-NM_001179069.1_MUCL30387 | cds-NP_011106.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:532904-534000:+ | gene-YER179W_MUCL30388 | rna-NM_001179069.1_MUCL30388 | cds-NP_011106.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:525697-526793:+ | gene-YER179W_MUCL39482 | rna-NM_001179069.1_MUCL39482 | cds-NP_011106.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:540223-541319:+ | gene-YER179W_MUCL42920 | rna-NM_001179069.1_MUCL42920 | cds-NP_011106.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:548420-549516:+ | gene-YER179W_NCIM3186 | rna-NM_001179069.1_NCIM3186 | cds-NP_011106.1_NCIM3186 | 97.0 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:535153-536249:+ | gene-YER179W_NCYC1407 | rna-NM_001179069.1_NCYC1407 | cds-NP_011106.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:551093-552189:+ | gene-YER179W_PE2H3 | rna-NM_001179069.1_PE2H3 | cds-NP_011106.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:541026-542122:+ | gene-YER179W_PE2H4 | rna-NM_001179069.1_PE2H4 | cds-NP_011106.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:548421-549517:+ | gene-YER179W_S288C | rna-NM_001179069.1_S288C | cds-NP_011106.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000030.1:100576-101672:+ | gene-YER179W_SA1 | rna-NM_001179069.1_SA1 | cds-NP_011106.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:537638-538734:+ | gene-YER179W_ThermosaccDry | rna-NM_001179069.1_ThermosaccDry | cds-NP_011106.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:530929-532025:+ | gene-YER179W_VR1 | rna-NM_001179069.1_VR1 | cds-NP_011106.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000011.1:50491-51587:+ | gene-YER179W_ZTW1 | rna-NM_001179069.1_ZTW1 | cds-NP_011106.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:538947-540042:+ | gene-YER179W_Sparadoxus | rna-NM_001179069.1_Sparadoxus | cds-NP_011106.1_Sparadoxus | 91.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |