Gene name: DLS1
Reference locus (S288C): YJL065C
Gene biotype: protein_coding
Description: Protein DLS1; Subunit of ISW2/yCHRAC chromatin accessibility complex; ISW2/yCHRAC also includes Itc1p, Isw2p, and Dpb4p; involved in inheritance of telomeric silencing; DLS1 has a paralog, DPB3, that arose from the whole genome duplication
Top 10 interactors (score): DPB4 (0.999); ITC1 (0.997); ISW2 (0.996); IOC2 (0.975); IOC4 (0.97); IOC3 (0.954); POL2 (0.952); DPB2 (0.936); CDC45 (0.931); ISW1 (0.916); ORC5 (0.914); ORC1 (0.911); MCM7 (0.91); MCM10 (0.908); MCM6 (0.908); MCM5 (0.908); MCM3 (0.908); ORC2 (0.908); ORC4 (0.908); CDC6 (0.907)
Homologues (species, bitscore): CHRAC1 (Homo sapiens, 50.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:297922-298425:- | gene-YJL065C_AKU4011 | rna-NM_001181498.1_AKU4011 | cds-NP_012470.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:316087-316590:+ | gene-YJL065C_BG1 | rna-NM_001181498.1_BG1 | cds-NP_012470.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:310456-310959:- | gene-YJL065C_Bruggeman | rna-NM_001181498.1_Bruggeman | cds-NP_012470.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:314564-315070:- | gene-YJL065C_CAT1 | rna-NM_001181498.1_CAT1 | cds-NP_012470.1_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:309576-310079:- | gene-YJL065C_CBS1585 | rna-NM_001181498.1_CBS1585 | cds-NP_012470.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:327586-328089:- | gene-YJL065C_CBS436 | rna-NM_001181498.1_CBS436 | cds-NP_012470.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:298680-299183:- | gene-YJL065C_CBS6412 | rna-NM_001181498.1_CBS6412 | cds-NP_012470.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:300029-300532:- | gene-YJL065C_CBS6413 | rna-NM_001181498.1_CBS6413 | cds-NP_012470.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:297523-298026:- | gene-YJL065C_CENPK1137D | rna-NM_001181498.1_CENPK1137D | cds-NP_012470.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:301760-302263:- | gene-YJL065C_EthanolRed | rna-NM_001181498.1_EthanolRed | cds-NP_012470.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:313335-313838:- | gene-YJL065C_FaliES1 | rna-NM_001181498.1_FaliES1 | cds-NP_012470.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000138.1:110918-111421:- | gene-YJL065C_JAY291 | rna-NM_001181498.1_JAY291 | cds-NP_012470.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:311613-312116:- | gene-YJL065C_MUCL30387 | rna-NM_001181498.1_MUCL30387 | cds-NP_012470.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:307650-308153:- | gene-YJL065C_MUCL30388 | rna-NM_001181498.1_MUCL30388 | cds-NP_012470.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:302332-302835:- | gene-YJL065C_MUCL39482 | rna-NM_001181498.1_MUCL39482 | cds-NP_012470.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:308977-309480:- | gene-YJL065C_MUCL42920 | rna-NM_001181498.1_MUCL42920 | cds-NP_012470.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:315033-315536:- | gene-YJL065C_NCIM3186 | rna-NM_001181498.1_NCIM3186 | cds-NP_012470.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:301028-301531:- | gene-YJL065C_NCYC1407 | rna-NM_001181498.1_NCYC1407 | cds-NP_012470.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:313378-313881:- | gene-YJL065C_PE2H3 | rna-NM_001181498.1_PE2H3 | cds-NP_012470.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:313022-313525:- | gene-YJL065C_PE2H4 | rna-NM_001181498.1_PE2H4 | cds-NP_012470.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:315054-315557:- | gene-YJL065C_S288C | rna-NM_001181498.1_S288C | cds-NP_012470.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000003.1:110941-111444:- | gene-YJL065C_SA1 | rna-NM_001181498.1_SA1 | cds-NP_012470.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:306748-307251:- | gene-YJL065C_ThermosaccDry | rna-NM_001181498.1_ThermosaccDry | cds-NP_012470.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:308932-309435:- | gene-YJL065C_VR1 | rna-NM_001181498.1_VR1 | cds-NP_012470.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:288126-288629:- | gene-YJL065C_ZTW1 | rna-NM_001181498.1_ZTW1 | cds-NP_012470.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:312156-312656:- | gene-YJL065C_Sparadoxus | rna-NM_001181498.1_Sparadoxus | cds-NP_012470.1_Sparadoxus | 89.0 | 99.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |