DJP1 (YIR004W)


Gene profile

Gene name: DJP1
Reference locus (S288C): YIR004W
Gene biotype: protein_coding

Description: DnaJ-like protein 1; Cytosolic J-domain-containing protein; required for peroxisomal protein import and involved in peroxisome assembly; facilitates import of Mim1p and Mim2p into the mitochondrial outer membrane; homologous to E. coli DnaJ

Top 10 interactors (score): TOM70 (0.895); SWA2 (0.878); JAC1 (0.811); JJJ3 (0.804); ERJ5 (0.8); ZUO1 (0.799); KAR2 (0.794); MDJ2 (0.786); JID1 (0.786); PAM18 (0.785); ECM10 (0.762); SSZ1 (0.75); DCI1 (0.746); HSP32 (0.703); CEF1 (0.699); PEX18 (0.69); SSQ1 (0.686); TOM22 (0.677); PEX15 (0.651); SNO4 (0.647)

Homologues (species, bitscore): DNAJC10 (Homo sapiens, 89.7); Dnajc10 (Mus musculus, 89.0); dnajb6b (Danio rerio, 88.2); dnajc10 (Xenopus tropicalis, 90.9); Droj2 (Drosophila melanogaster, 83.6); dnj-12 (Caenorhabditis elegans, 82.8); AT2G21510 (Arabidopsis thaliana, 144.8)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005303.1:362612-363910:+ gene-YIR004W_AKU4011 rna-NM_001179526.1_AKU4011 cds-NP_012269.1_AKU4011 99.6 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000072.1:62695-63993:- gene-YIR004W_BG1 rna-NM_001179526.1_BG1 cds-NP_012269.1_BG1 99.9 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005511.1:367049-368347:+ gene-YIR004W_Bruggeman rna-NM_001179526.1_Bruggeman cds-NP_012269.1_Bruggeman 99.9 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005527.1:353715-355013:+ gene-YIR004W_CAT1 rna-NM_001179526.1_CAT1 cds-NP_012269.1_CAT1 99.9 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005367.1:362629-363927:+ gene-YIR004W_CBS1585 rna-NM_001179526.1_CBS1585 cds-NP_012269.1_CBS1585 99.6 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005351.1:355281-356579:+ gene-YIR004W_CBS436 rna-NM_001179526.1_CBS436 cds-NP_012269.1_CBS436 99.9 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005335.1:358132-359430:+ gene-YIR004W_CBS6412 rna-NM_001179526.1_CBS6412 cds-NP_012269.1_CBS6412 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005319.1:354709-356007:+ gene-YIR004W_CBS6413 rna-NM_001179526.1_CBS6413 cds-NP_012269.1_CBS6413 99.6 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001530.1:355282-356580:+ gene-YIR004W_CENPK1137D rna-NM_001179526.1_CENPK1137D cds-NP_012269.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005479.1:345686-346984:+ gene-YIR004W_EthanolRed rna-NM_001179526.1_EthanolRed cds-NP_012269.1_EthanolRed 99.6 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005543.1:363929-365227:+ gene-YIR004W_FaliES1 rna-NM_001179526.1_FaliES1 cds-NP_012269.1_FaliES1 99.6 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000009.1:26277-27575:- gene-YIR004W_JAY291 rna-NM_001179526.1_JAY291 cds-NP_012269.1_JAY291 99.9 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005415.1:364254-365552:+ gene-YIR004W_MUCL30387 rna-NM_001179526.1_MUCL30387 cds-NP_012269.1_MUCL30387 99.9 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005447.1:360999-362297:+ gene-YIR004W_MUCL30388 rna-NM_001179526.1_MUCL30388 cds-NP_012269.1_MUCL30388 99.9 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005287.1:363266-364564:+ gene-YIR004W_MUCL39482 rna-NM_001179526.1_MUCL39482 cds-NP_012269.1_MUCL39482 99.6 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005431.1:366862-368160:+ gene-YIR004W_MUCL42920 rna-NM_001179526.1_MUCL42920 cds-NP_012269.1_MUCL42920 99.8 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011818.1:363221-364519:+ gene-YIR004W_NCIM3186 rna-NM_001179526.1_NCIM3186 cds-NP_012269.1_NCIM3186 99.8 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005271.1:367511-368809:+ gene-YIR004W_NCYC1407 rna-NM_001179526.1_NCYC1407 cds-NP_012269.1_NCYC1407 99.5 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994148.1:357293-358591:+ gene-YIR004W_PE2H3 rna-NM_001179526.1_PE2H3 cds-NP_012269.1_PE2H3 99.9 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999880.1:351999-353297:+ gene-YIR004W_PE2H4 rna-NM_001179526.1_PE2H4 cds-NP_012269.1_PE2H4 99.9 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001141.2:363221-364519:+ gene-YIR004W_S288C rna-NM_001179526.1_S288C cds-NP_012269.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000066.1:38074-39372:+ gene-YIR004W_SA1 rna-NM_001179526.1_SA1 cds-NP_012269.1_SA1 99.7 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005495.1:362035-363333:+ gene-YIR004W_ThermosaccDry rna-NM_001179526.1_ThermosaccDry cds-NP_012269.1_ThermosaccDry 99.6 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005463.1:357854-359152:+ gene-YIR004W_VR1 rna-NM_001179526.1_VR1 cds-NP_012269.1_VR1 99.8 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000019.1:336031-337329:+ gene-YIR004W_ZTW1 rna-NM_001179526.1_ZTW1 cds-NP_012269.1_ZTW1 99.7 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047495.1:357369-358667:+ gene-YIR004W_Sparadoxus rna-NM_001179526.1_Sparadoxus cds-NP_012269.1_Sparadoxus 89.4 99.4 Verified 1 1 1 False True False False False

Additional files