Gene name: DIM1
Reference locus (S288C): YPL266W
Gene biotype: protein_coding
Description: Essential 18S rRNA dimethylase (dimethyladenosine transferase); responsible for conserved m6(2)Am6(2)A dimethylation in 3'-terminal loop of 18S rRNA, part of 90S and 40S pre-particles in nucleolus, involved in pre-ribosomal RNA processing; human homolog DIMT1 complements yeast dim1 mutant
Top 10 interactors (score): SOF1 (0.999); UTP4 (0.999); RRP5 (0.999); BMS1 (0.999); ENP1 (0.999); PWP2 (0.999); NOP56 (0.999); NAN1 (0.999); UTP15 (0.999); DIP2 (0.999); RRP9 (0.999); PNO1 (0.999); IMP3 (0.999); YTM1 (0.999); UTP13 (0.999); RIO2 (0.999); NOP58 (0.999); IMP4 (0.999); TSR1 (0.999); NOP1 (0.999)
Homologues (species, bitscore): DIMT1 (Homo sapiens, 372.1); Dimt1 (Mus musculus, 370.9); dimt1l (Danio rerio, 368.2); dimt1 (Xenopus tropicalis, 371.3); CG11837 (Drosophila melanogaster, 366.7); E02H1.1 (Caenorhabditis elegans, 307.8); DIM1A (Arabidopsis thaliana, 334.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:23427-24383:+ | gene-YPL266W_AKU4011 | rna-NM_001184080.1_AKU4011 | cds-NP_015057.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000185.1:16405-17361:- | gene-YPL266W_BG1 | rna-NM_001184080.1_BG1 | cds-NP_015057.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:40663-41619:+ | gene-YPL266W_Bruggeman | rna-NM_001184080.1_Bruggeman | cds-NP_015057.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:38630-39586:+ | gene-YPL266W_CAT1 | rna-NM_001184080.1_CAT1 | cds-NP_015057.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:27135-28091:+ | gene-YPL266W_CBS1585 | rna-NM_001184080.1_CBS1585 | cds-NP_015057.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:35525-36481:+ | gene-YPL266W_CBS436 | rna-NM_001184080.1_CBS436 | cds-NP_015057.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:32039-32995:+ | gene-YPL266W_CBS6412 | rna-NM_001184080.1_CBS6412 | cds-NP_015057.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:23287-24243:+ | gene-YPL266W_CBS6413 | rna-NM_001184080.1_CBS6413 | cds-NP_015057.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:39069-40025:+ | gene-YPL266W_CENPK1137D | rna-NM_001184080.1_CENPK1137D | cds-NP_015057.1_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:22466-23422:+ | gene-YPL266W_EthanolRed | rna-NM_001184080.1_EthanolRed | cds-NP_015057.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:22814-23770:+ | gene-YPL266W_FaliES1 | rna-NM_001184080.1_FaliES1 | cds-NP_015057.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000190.1:16318-17274:- | gene-YPL266W_JAY291 | rna-NM_001184080.1_JAY291 | cds-NP_015057.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:39937-40893:+ | gene-YPL266W_MUCL30387 | rna-NM_001184080.1_MUCL30387 | cds-NP_015057.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:38126-39082:+ | gene-YPL266W_MUCL30388 | rna-NM_001184080.1_MUCL30388 | cds-NP_015057.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:20265-21221:+ | gene-YPL266W_MUCL39482 | rna-NM_001184080.1_MUCL39482 | cds-NP_015057.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:32422-33378:+ | gene-YPL266W_MUCL42920 | rna-NM_001184080.1_MUCL42920 | cds-NP_015057.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:39104-40060:+ | gene-YPL266W_NCIM3186 | rna-NM_001184080.1_NCIM3186 | cds-NP_015057.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:26711-27667:+ | gene-YPL266W_NCYC1407 | rna-NM_001184080.1_NCYC1407 | cds-NP_015057.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:30360-31316:+ | gene-YPL266W_PE2H3 | rna-NM_001184080.1_PE2H3 | cds-NP_015057.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:30337-31293:+ | gene-YPL266W_PE2H4 | rna-NM_001184080.1_PE2H4 | cds-NP_015057.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:39121-40077:+ | gene-YPL266W_S288C | rna-NM_001184080.1_S288C | cds-NP_015057.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000104.1:16446-17402:- | gene-YPL266W_SA1 | rna-NM_001184080.1_SA1 | cds-NP_015057.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:22815-23771:+ | gene-YPL266W_ThermosaccDry | rna-NM_001184080.1_ThermosaccDry | cds-NP_015057.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:269215-270171:+ | gene-YPL266W_VR1 | rna-NM_001184080.1_VR1 | cds-NP_015057.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:28937-29893:+ | gene-YPL266W_ZTW1 | rna-NM_001184080.1_ZTW1 | cds-NP_015057.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:30801-31757:+ | gene-YPL266W_Sparadoxus | rna-NM_001184080.1_Sparadoxus | cds-NP_015057.1_Sparadoxus | 92.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |