Gene name: DID2
Reference locus (S288C): YKR035W-A
Gene biotype: protein_coding
Description: Class E protein of the vacuolar protein-sorting (Vps) pathway; binds Vps4p and directs it to dissociate ESCRT-III complexes; forms a functional and physical complex with Ist1p; human ortholog may be altered in breast tumors
Top 10 interactors (score): VPS60 (0.999); VTA1 (0.999); DID4 (0.999); VPS4 (0.999); VPS24 (0.999); IST1 (0.999); SNF7 (0.999); VPS20 (0.994); VPS25 (0.982); VPS36 (0.979); STP22 (0.975); VPS28 (0.972); CHM7 (0.962); MIM2 (0.93); MOH1 (0.912); BRO1 (0.911); DOA4 (0.898); VPS27 (0.868); SNF8 (0.805); MIM1 (0.746)
Homologues (species, bitscore): CHMP1A (Homo sapiens, 170.6); Chmp1a (Mus musculus, 171.0); chmp1a (Danio rerio, 160.2); chmp1a (Xenopus tropicalis, 170.2); Chmp1 (Drosophila melanogaster, 151.0); did-2 (Caenorhabditis elegans, 149.1); VPS46.2 (Arabidopsis thaliana, 127.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:493607-494221:+ | gene-YKR035W-A_AKU4011 | rna-NM_001184309.3_AKU4011 | cds-NP_012961.3_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000113.1:149256-149870:- | gene-YKR035W-A_BG1 | rna-NM_001184309.3_BG1 | cds-NP_012961.3_BG1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:515786-516400:+ | gene-YKR035W-A_Bruggeman | rna-NM_001184309.3_Bruggeman | cds-NP_012961.3_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:511034-511648:+ | gene-YKR035W-A_CAT1 | rna-NM_001184309.3_CAT1 | cds-NP_012961.3_CAT1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:506347-506961:+ | gene-YKR035W-A_CBS1585 | rna-NM_001184309.3_CBS1585 | cds-NP_012961.3_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:505188-505802:+ | gene-YKR035W-A_CBS436 | rna-NM_001184309.3_CBS436 | cds-NP_012961.3_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:490508-491122:+ | gene-YKR035W-A_CBS6412 | rna-NM_001184309.3_CBS6412 | cds-NP_012961.3_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:506176-506790:+ | gene-YKR035W-A_CBS6413 | rna-NM_001184309.3_CBS6413 | cds-NP_012961.3_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:507681-508331:+ | gene-YKR035W-A_CENPK1137D | rna-NM_001184309.3_CENPK1137D | cds-NP_012961.3_CENPK1137D | 94.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:503873-504487:+ | gene-YKR035W-A_EthanolRed | rna-NM_001184309.3_EthanolRed | cds-NP_012961.3_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:507006-507620:+ | gene-YKR035W-A_FaliES1 | rna-NM_001184309.3_FaliES1 | cds-NP_012961.3_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000077.1:46125-46739:- | gene-YKR035W-A_JAY291 | rna-NM_001184309.3_JAY291 | cds-NP_012961.3_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:515936-516550:+ | gene-YKR035W-A_MUCL30387 | rna-NM_001184309.3_MUCL30387 | cds-NP_012961.3_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:510550-511164:+ | gene-YKR035W-A_MUCL30388 | rna-NM_001184309.3_MUCL30388 | cds-NP_012961.3_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:505665-506279:+ | gene-YKR035W-A_MUCL39482 | rna-NM_001184309.3_MUCL39482 | cds-NP_012961.3_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:511704-512318:+ | gene-YKR035W-A_MUCL42920 | rna-NM_001184309.3_MUCL42920 | cds-NP_012961.3_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:507928-508542:+ | gene-YKR035W-A_NCIM3186 | rna-NM_001184309.3_NCIM3186 | cds-NP_012961.3_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:505871-506485:+ | gene-YKR035W-A_NCYC1407 | rna-NM_001184309.3_NCYC1407 | cds-NP_012961.3_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:530872-531486:+ | gene-YKR035W-A_PE2H3 | rna-NM_001184309.3_PE2H3 | cds-NP_012961.3_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:515595-516209:+ | gene-YKR035W-A_PE2H4 | rna-NM_001184309.3_PE2H4 | cds-NP_012961.3_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:507939-508553:+ | gene-YKR035W-A_S288C | rna-NM_001184309.3_S288C | cds-NP_012961.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000078.1:5190-5804:- | gene-YKR035W-A_SA1 | rna-NM_001184309.3_SA1 | cds-NP_012961.3_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:506259-506873:+ | gene-YKR035W-A_ThermosaccDry | rna-NM_001184309.3_ThermosaccDry | cds-NP_012961.3_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:505892-506506:+ | gene-YKR035W-A_VR1 | rna-NM_001184309.3_VR1 | cds-NP_012961.3_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:504306-504920:+ | gene-YKR035W-A_ZTW1 | rna-NM_001184309.3_ZTW1 | cds-NP_012961.3_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:529592-530206:+ | gene-YKR035W-A_Sparadoxus | rna-NM_001184309.3_Sparadoxus | cds-NP_012961.3_Sparadoxus | 90.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |