Gene name: DIA4
Reference locus (S288C): YHR011W
Gene biotype: protein_coding
Description: Serine--tRNA ligase, mitochondrial; Probable mitochondrial seryl-tRNA synthetase; mutant displays increased invasive and pseudohyphal growth; Belongs to the class-II aminoacyl-tRNA synthetase family. Type-1 seryl-tRNA synthetase subfamily
Top 10 interactors (score): YNL247W (0.983); AIM10 (0.975); NAM2 (0.973); MSY1 (0.97); MSE1 (0.963); GLN4 (0.95); MSR1 (0.947); YDR341C (0.943); MSF1 (0.941); MSD1 (0.928); KRS1 (0.92); TYS1 (0.908); CDC60 (0.908); HTS1 (0.893); GUS1 (0.885); YHR020W (0.877); MSW1 (0.86); SES1 (0.853); PEX21 (0.837); SLM5 (0.831)
Homologues (species, bitscore): ENSP00000472465 (Homo sapiens, 229.9); Sars2 (Mus musculus, 236.5); sars2 (Danio rerio, 245.0); sars2 (Xenopus tropicalis, 212.6); Aats-ser (Drosophila melanogaster, 240.7); sars-2 (Caenorhabditis elegans, 196.1); SRS (Arabidopsis thaliana, 264.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:116070-117410:+ | gene-YHR011W_AKU4011 | rna-NM_001179141.1_AKU4011 | cds-NP_011875.1_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000053.1:35868-37208:+ | gene-YHR011W_BG1 | rna-NM_001179141.1_BG1 | cds-NP_011875.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:122901-124241:+ | gene-YHR011W_Bruggeman | rna-NM_001179141.1_Bruggeman | cds-NP_011875.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:117135-118475:+ | gene-YHR011W_CAT1 | rna-NM_001179141.1_CAT1 | cds-NP_011875.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:116655-117995:+ | gene-YHR011W_CBS1585 | rna-NM_001179141.1_CBS1585 | cds-NP_011875.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:109472-110812:+ | gene-YHR011W_CBS436 | rna-NM_001179141.1_CBS436 | cds-NP_011875.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:116252-117592:+ | gene-YHR011W_CBS6412 | rna-NM_001179141.1_CBS6412 | cds-NP_011875.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:115988-117328:+ | gene-YHR011W_CBS6413 | rna-NM_001179141.1_CBS6413 | cds-NP_011875.1_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:120939-122279:+ | gene-YHR011W_CENPK1137D | rna-NM_001179141.1_CENPK1137D | cds-NP_011875.1_CENPK1137D | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:115867-117207:+ | gene-YHR011W_EthanolRed | rna-NM_001179141.1_EthanolRed | cds-NP_011875.1_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:116845-118185:+ | gene-YHR011W_FaliES1 | rna-NM_001179141.1_FaliES1 | cds-NP_011875.1_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000064.1:4036-5376:- | gene-YHR011W_JAY291 | rna-NM_001179141.1_JAY291 | cds-NP_011875.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:121452-122792:+ | gene-YHR011W_MUCL30387 | rna-NM_001179141.1_MUCL30387 | cds-NP_011875.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:122329-123669:+ | gene-YHR011W_MUCL30388 | rna-NM_001179141.1_MUCL30388 | cds-NP_011875.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:115682-117022:+ | gene-YHR011W_MUCL39482 | rna-NM_001179141.1_MUCL39482 | cds-NP_011875.1_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:120492-121832:+ | gene-YHR011W_MUCL42920 | rna-NM_001179141.1_MUCL42920 | cds-NP_011875.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:127662-129002:+ | gene-YHR011W_NCIM3186 | rna-NM_001179141.1_NCIM3186 | cds-NP_011875.1_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:115096-116436:+ | gene-YHR011W_NCYC1407 | rna-NM_001179141.1_NCYC1407 | cds-NP_011875.1_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:117297-118637:+ | gene-YHR011W_PE2H3 | rna-NM_001179141.1_PE2H3 | cds-NP_011875.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:124738-126078:+ | gene-YHR011W_PE2H4 | rna-NM_001179141.1_PE2H4 | cds-NP_011875.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:127780-129120:+ | gene-YHR011W_S288C | rna-NM_001179141.1_S288C | cds-NP_011875.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000075.1:17755-19095:- | gene-YHR011W_SA1 | rna-NM_001179141.1_SA1 | cds-NP_011875.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:117934-119274:+ | gene-YHR011W_ThermosaccDry | rna-NM_001179141.1_ThermosaccDry | cds-NP_011875.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:123460-124800:+ | gene-YHR011W_VR1 | rna-NM_001179141.1_VR1 | cds-NP_011875.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:109172-110512:+ | gene-YHR011W_ZTW1 | rna-NM_001179141.1_ZTW1 | cds-NP_011875.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:115559-116899:+ | gene-YHR011W_Sparadoxus | rna-NM_001179141.1_Sparadoxus | cds-NP_011875.1_Sparadoxus | 90.1 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |