Gene name: DHR2
Reference locus (S288C): YKL078W
Gene biotype: protein_coding
Description: Probable atp-dependent rna helicase dhr2; Predominantly nucleolar DEAH-box ATP-dependent RNA helicase; required for 18S rRNA synthesis
Top 10 interactors (score): SLX9 (0.999); NOP19 (0.999); MPP10 (0.999); DBP8 (0.999); UTP14 (0.999); UTP22 (0.999); SGD1 (0.998); HCA4 (0.998); ENP1 (0.998); ROK1 (0.997); RRP9 (0.997); FAL1 (0.997); MTR4 (0.996); MAK5 (0.996); UTP18 (0.996); NOP14 (0.996); DBP10 (0.995); UTP25 (0.995); UTP6 (0.995); ECM16 (0.994)
Homologues (species, bitscore): DHX8 (Homo sapiens, 469.9); Dhx8 (Mus musculus, 469.5); dhx8 (Danio rerio, 472.6); dhx8 (Xenopus tropicalis, 476.5); pea (Drosophila melanogaster, 479.2); mog-5 (Caenorhabditis elegans, 458.8); AT3G26560 (Arabidopsis thaliana, 477.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:275403-277610:+ | gene-YKL078W_AKU4011 | rna-NM_001179644.1_AKU4011 | cds-NP_012845.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000113.1:367132-369249:- | gene-YKL078W_BG1 | rna-NM_001179644.1_BG1 | cds-NP_012845.1_BG1 | 95.5 | 95.9 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:293568-295775:+ | gene-YKL078W_Bruggeman | rna-NM_001179644.1_Bruggeman | cds-NP_012845.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:288373-290580:+ | gene-YKL078W_CAT1 | rna-NM_001179644.1_CAT1 | cds-NP_012845.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:287644-289851:+ | gene-YKL078W_CBS1585 | rna-NM_001179644.1_CBS1585 | cds-NP_012845.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:286237-288444:+ | gene-YKL078W_CBS436 | rna-NM_001179644.1_CBS436 | cds-NP_012845.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:272271-274478:+ | gene-YKL078W_CBS6412 | rna-NM_001179644.1_CBS6412 | cds-NP_012845.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:288098-290305:+ | gene-YKL078W_CBS6413 | rna-NM_001179644.1_CBS6413 | cds-NP_012845.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:288488-290695:+ | gene-YKL078W_CENPK1137D | rna-NM_001179644.1_CENPK1137D | cds-NP_012845.1_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:286094-288301:+ | gene-YKL078W_EthanolRed | rna-NM_001179644.1_EthanolRed | cds-NP_012845.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:286906-289113:+ | gene-YKL078W_FaliES1 | rna-NM_001179644.1_FaliES1 | cds-NP_012845.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000357.1:109235-111442:+ | gene-YKL078W_JAY291 | rna-NM_001179644.1_JAY291 | cds-NP_012845.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:295369-297576:+ | gene-YKL078W_MUCL30387 | rna-NM_001179644.1_MUCL30387 | cds-NP_012845.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:289764-291971:+ | gene-YKL078W_MUCL30388 | rna-NM_001179644.1_MUCL30388 | cds-NP_012845.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:287429-289636:+ | gene-YKL078W_MUCL39482 | rna-NM_001179644.1_MUCL39482 | cds-NP_012845.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:292058-294265:+ | gene-YKL078W_MUCL42920 | rna-NM_001179644.1_MUCL42920 | cds-NP_012845.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:288834-291041:+ | gene-YKL078W_NCIM3186 | rna-NM_001179644.1_NCIM3186 | cds-NP_012845.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:287624-289831:+ | gene-YKL078W_NCYC1407 | rna-NM_001179644.1_NCYC1407 | cds-NP_012845.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:294713-296920:+ | gene-YKL078W_PE2H3 | rna-NM_001179644.1_PE2H3 | cds-NP_012845.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:291000-293207:+ | gene-YKL078W_PE2H4 | rna-NM_001179644.1_PE2H4 | cds-NP_012845.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:288845-291052:+ | gene-YKL078W_S288C | rna-NM_001179644.1_S288C | cds-NP_012845.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000008.1:204973-207180:+ | gene-YKL078W_SA1 | rna-NM_001179644.1_SA1 | cds-NP_012845.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:287615-289822:+ | gene-YKL078W_ThermosaccDry | rna-NM_001179644.1_ThermosaccDry | cds-NP_012845.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:286973-289180:+ | gene-YKL078W_VR1 | rna-NM_001179644.1_VR1 | cds-NP_012845.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:286174-288381:+ | gene-YKL078W_ZTW1 | rna-NM_001179644.1_ZTW1 | cds-NP_012845.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:303238-305442:+ | gene-YKL078W_Sparadoxus | rna-NM_001179644.1_Sparadoxus | cds-NP_012845.1_Sparadoxus | 89.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |