Gene name: DED81
Reference locus (S288C): YHR019C
Gene biotype: protein_coding
Description: Asparagine--tRNA ligase, cytoplasmic; Cytosolic asparaginyl-tRNA synthetase; required for protein synthesis, catalyzes the specific attachment of asparagine to its cognate tRNA; Belongs to the class-II aminoacyl-tRNA synthetase family
Top 10 interactors (score): YHR020W (0.996); GUS1 (0.991); CDC60 (0.99); ILS1 (0.985); ALA1 (0.979); THS1 (0.979); FRS2 (0.971); PET112 (0.966); HTS1 (0.962); GLN4 (0.962); GRS1 (0.957); YDR341C (0.953); WRS1 (0.952); VAS1 (0.948); TYS1 (0.947); HER2 (0.944); SES1 (0.931); THR1 (0.909); GUA1 (0.894); NAM2 (0.879)
Homologues (species, bitscore): NARS (Homo sapiens, 573.9); Nars (Mus musculus, 572.4); nars (Danio rerio, 563.1); nars (Xenopus tropicalis, 546.2); Aats-asn (Drosophila melanogaster, 587.4); nars-1 (Caenorhabditis elegans, 557.4); NS1 (Arabidopsis thaliana, 203.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:130435-132099:- | gene-YHR019C_AKU4011 | rna-NM_001179149.1_AKU4011 | cds-NP_011883.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000053.1:50381-52045:- | gene-YHR019C_BG1 | rna-NM_001179149.1_BG1 | cds-NP_011883.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:137013-138677:- | gene-YHR019C_Bruggeman | rna-NM_001179149.1_Bruggeman | cds-NP_011883.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:131601-133265:- | gene-YHR019C_CAT1 | rna-NM_001179149.1_CAT1 | cds-NP_011883.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:130767-132431:- | gene-YHR019C_CBS1585 | rna-NM_001179149.1_CBS1585 | cds-NP_011883.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:124105-125769:- | gene-YHR019C_CBS436 | rna-NM_001179149.1_CBS436 | cds-NP_011883.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:130457-132121:- | gene-YHR019C_CBS6412 | rna-NM_001179149.1_CBS6412 | cds-NP_011883.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:130100-131764:- | gene-YHR019C_CBS6413 | rna-NM_001179149.1_CBS6413 | cds-NP_011883.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:135164-136828:- | gene-YHR019C_CENPK1137D | rna-NM_001179149.1_CENPK1137D | cds-NP_011883.1_CENPK1137D | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:129981-131645:- | gene-YHR019C_EthanolRed | rna-NM_001179149.1_EthanolRed | cds-NP_011883.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:130960-132624:- | gene-YHR019C_FaliES1 | rna-NM_001179149.1_FaliES1 | cds-NP_011883.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000424.1:2800-4464:+ | gene-YHR019C_JAY291 | rna-NM_001179149.1_JAY291 | cds-NP_011883.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:137019-138683:- | gene-YHR019C_MUCL30387 | rna-NM_001179149.1_MUCL30387 | cds-NP_011883.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:137503-139167:- | gene-YHR019C_MUCL30388 | rna-NM_001179149.1_MUCL30388 | cds-NP_011883.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:129794-131458:- | gene-YHR019C_MUCL39482 | rna-NM_001179149.1_MUCL39482 | cds-NP_011883.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:135324-136988:- | gene-YHR019C_MUCL42920 | rna-NM_001179149.1_MUCL42920 | cds-NP_011883.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:141776-143440:- | gene-YHR019C_NCIM3186 | rna-NM_001179149.1_NCIM3186 | cds-NP_011883.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:129208-130872:- | gene-YHR019C_NCYC1407 | rna-NM_001179149.1_NCYC1407 | cds-NP_011883.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:131777-133441:- | gene-YHR019C_PE2H3 | rna-NM_001179149.1_PE2H3 | cds-NP_011883.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:139218-140882:- | gene-YHR019C_PE2H4 | rna-NM_001179149.1_PE2H4 | cds-NP_011883.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:141894-143558:- | gene-YHR019C_S288C | rna-NM_001179149.1_S288C | cds-NP_011883.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000075.1:2950-4614:+ | gene-YHR019C_SA1 | rna-NM_001179149.1_SA1 | cds-NP_011883.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:132049-133713:- | gene-YHR019C_ThermosaccDry | rna-NM_001179149.1_ThermosaccDry | cds-NP_011883.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:137848-139512:- | gene-YHR019C_VR1 | rna-NM_001179149.1_VR1 | cds-NP_011883.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:123286-124950:- | gene-YHR019C_ZTW1 | rna-NM_001179149.1_ZTW1 | cds-NP_011883.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:130170-131834:- | gene-YHR019C_Sparadoxus | rna-NM_001179149.1_Sparadoxus | cds-NP_011883.1_Sparadoxus | 93.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |