Gene name: DDP1
Reference locus (S288C): YOR163W
Gene biotype: protein_coding
Description: Diphosphoinositol polyphosphate phosphohydrolase DDP1; Polyphosphate phosphatase; hydrolyzes diphosphorylated inositol polyphosphates and diadenosine polyphosphates; high specificity for diadenosine hexa- and pentaphosphates; contains endopolyphosphatase activity with a high affinity for polyphosphates, an activity also observed for its human DIPP homologs; possesses mRNA decapping activity; nudix hydrolase family member; protein abundance increases in response to DNA replication stress
Top 10 interactors (score): KCS1 (0.905); YSA1 (0.901); NPY1 (0.895); PPN1 (0.869); PCD1 (0.86); ADO1 (0.835); SIW14 (0.83); RPS15 (0.81); DCP1 (0.784); RPS13 (0.783); SUI2 (0.775); RPS2 (0.755); ASC1 (0.755); PPX1 (0.752); RLI1 (0.752); GCD11 (0.749); RPS31 (0.745); VIP1 (0.726); RPS12 (0.725); RPS28A (0.722)
Homologues (species, bitscore): NUDT10 (Homo sapiens, 56.6); Nudt10 (Mus musculus, 55.1); nudt3b (Danio rerio, 53.5); nudt4 (Xenopus tropicalis, 51.2); Aps (Drosophila melanogaster, 58.9); Y92H12BL.5 (Caenorhabditis elegans, 51.6); NUDT21 (Arabidopsis thaliana, 58.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:640380-640946:+ | gene-YOR163W_AKU4011 | rna-NM_001183582.1_AKU4011 | cds-NP_014806.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000123.1:42135-42701:+ | gene-YOR163W_BG1 | rna-NM_001183582.1_BG1 | cds-NP_014806.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:624454-625020:+ | gene-YOR163W_Bruggeman | rna-NM_001183582.1_Bruggeman | cds-NP_014806.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:624473-625039:+ | gene-YOR163W_CAT1 | rna-NM_001183582.1_CAT1 | cds-NP_014806.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:622875-623441:+ | gene-YOR163W_CBS1585 | rna-NM_001183582.1_CBS1585 | cds-NP_014806.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:621170-621736:+ | gene-YOR163W_CBS436 | rna-NM_001183582.1_CBS436 | cds-NP_014806.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:620487-621053:+ | gene-YOR163W_CBS6412 | rna-NM_001183582.1_CBS6412 | cds-NP_014806.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:629168-629734:+ | gene-YOR163W_CBS6413 | rna-NM_001183582.1_CBS6413 | cds-NP_014806.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:642500-643066:+ | gene-YOR163W_CENPK1137D | rna-NM_001183582.1_CENPK1137D | cds-NP_014806.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:616584-617150:+ | gene-YOR163W_EthanolRed | rna-NM_001183582.1_EthanolRed | cds-NP_014806.1_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:621437-622003:+ | gene-YOR163W_FaliES1 | rna-NM_001183582.1_FaliES1 | cds-NP_014806.1_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000070.1:21538-22104:- | gene-YOR163W_JAY291 | rna-NM_001183582.1_JAY291 | cds-NP_014806.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:629261-629827:+ | gene-YOR163W_MUCL30387 | rna-NM_001183582.1_MUCL30387 | cds-NP_014806.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:636024-636590:+ | gene-YOR163W_MUCL30388 | rna-NM_001183582.1_MUCL30388 | cds-NP_014806.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:630716-631282:+ | gene-YOR163W_MUCL39482 | rna-NM_001183582.1_MUCL39482 | cds-NP_014806.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:640138-640704:+ | gene-YOR163W_MUCL42920 | rna-NM_001183582.1_MUCL42920 | cds-NP_014806.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:642630-643196:+ | gene-YOR163W_NCIM3186 | rna-NM_001183582.1_NCIM3186 | cds-NP_014806.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:630802-631368:+ | gene-YOR163W_NCYC1407 | rna-NM_001183582.1_NCYC1407 | cds-NP_014806.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:629315-629881:+ | gene-YOR163W_PE2H3 | rna-NM_001183582.1_PE2H3 | cds-NP_014806.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:639692-640258:+ | gene-YOR163W_PE2H4 | rna-NM_001183582.1_PE2H4 | cds-NP_014806.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:642741-643307:+ | gene-YOR163W_S288C | rna-NM_001183582.1_S288C | cds-NP_014806.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000006.1:59300-59866:+ | gene-YOR163W_SA1 | rna-NM_001183582.1_SA1 | cds-NP_014806.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:620620-621186:+ | gene-YOR163W_ThermosaccDry | rna-NM_001183582.1_ThermosaccDry | cds-NP_014806.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:684317-684883:+ | gene-YOR163W_VR1 | rna-NM_001183582.1_VR1 | cds-NP_014806.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:354068-354634:+ | gene-YOR163W_ZTW1 | rna-NM_001183582.1_ZTW1 | cds-NP_014806.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:625694-626260:+ | gene-YOR163W_Sparadoxus | rna-NM_001183582.1_Sparadoxus | cds-NP_014806.1_Sparadoxus | 90.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |