Gene name: DDI1
Reference locus (S288C): YER143W
Gene biotype: protein_coding
Description: DNA damage-inducible v-SNARE binding protein; role in suppression of protein secretion; may play a role in S-phase checkpoint control; has ubiquitin-associated (UBA), ubiquitin-like (UBL), and retroviral-like proteinase (RVP) domains
Top 10 interactors (score): RAD23 (0.999); RPN10 (0.996); DSK2 (0.994); RPN13 (0.991); UBI4 (0.981); RPN11 (0.973); FAR8 (0.962); UFO1 (0.959); UBP6 (0.957); RPN1 (0.956); RPT5 (0.932); NPL4 (0.914); RPN12 (0.912); RPT3 (0.902); UFD2 (0.898); SRV2 (0.896); PAH1 (0.882); MDY2 (0.879); CDC48 (0.875); SNC2 (0.872)
Homologues (species, bitscore): DDI2 (Homo sapiens, 175.3); Ddi2 (Mus musculus, 174.1); ddi2 (Danio rerio, 180.3); ddi2 (Xenopus tropicalis, 175.3); rngo (Drosophila melanogaster, 178.3); C01G5.6 (Caenorhabditis elegans, 132.5); DDI1 (Arabidopsis thaliana, 208.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:443806-445092:+ | gene-YER143W_AKU4011 | rna-NM_001179033.3_AKU4011 | cds-NP_011070.3_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000176.1:99516-100802:- | gene-YER143W_BG1 | rna-NM_001179033.3_BG1 | cds-NP_011070.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:455091-456377:+ | gene-YER143W_Bruggeman | rna-NM_001179033.3_Bruggeman | cds-NP_011070.3_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:442932-444218:+ | gene-YER143W_CAT1 | rna-NM_001179033.3_CAT1 | cds-NP_011070.3_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:443624-444910:+ | gene-YER143W_CBS1585 | rna-NM_001179033.3_CBS1585 | cds-NP_011070.3_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:447431-448717:+ | gene-YER143W_CBS436 | rna-NM_001179033.3_CBS436 | cds-NP_011070.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:442127-443413:+ | gene-YER143W_CBS6412 | rna-NM_001179033.3_CBS6412 | cds-NP_011070.3_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:449671-450957:+ | gene-YER143W_CBS6413 | rna-NM_001179033.3_CBS6413 | cds-NP_011070.3_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:454092-455378:+ | gene-YER143W_CENPK1137D | rna-NM_001179033.3_CENPK1137D | cds-NP_011070.3_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:450087-451373:+ | gene-YER143W_EthanolRed | rna-NM_001179033.3_EthanolRed | cds-NP_011070.3_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:450673-451959:+ | gene-YER143W_FaliES1 | rna-NM_001179033.3_FaliES1 | cds-NP_011070.3_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000111.1:34521-35807:- | gene-YER143W_JAY291 | rna-NM_001179033.3_JAY291 | cds-NP_011070.3_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:443835-445121:+ | gene-YER143W_MUCL30387 | rna-NM_001179033.3_MUCL30387 | cds-NP_011070.3_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:446725-448011:+ | gene-YER143W_MUCL30388 | rna-NM_001179033.3_MUCL30388 | cds-NP_011070.3_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:439576-440862:+ | gene-YER143W_MUCL39482 | rna-NM_001179033.3_MUCL39482 | cds-NP_011070.3_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:451652-452938:+ | gene-YER143W_MUCL42920 | rna-NM_001179033.3_MUCL42920 | cds-NP_011070.3_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:456318-457604:+ | gene-YER143W_NCIM3186 | rna-NM_001179033.3_NCIM3186 | cds-NP_011070.3_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:449035-450321:+ | gene-YER143W_NCYC1407 | rna-NM_001179033.3_NCYC1407 | cds-NP_011070.3_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:464730-466016:+ | gene-YER143W_PE2H3 | rna-NM_001179033.3_PE2H3 | cds-NP_011070.3_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:454671-455957:+ | gene-YER143W_PE2H4 | rna-NM_001179033.3_PE2H4 | cds-NP_011070.3_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:456319-457605:+ | gene-YER143W_S288C | rna-NM_001179033.3_S288C | cds-NP_011070.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000030.1:14201-15487:+ | gene-YER143W_SA1 | rna-NM_001179033.3_SA1 | cds-NP_011070.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:451471-452757:+ | gene-YER143W_ThermosaccDry | rna-NM_001179033.3_ThermosaccDry | cds-NP_011070.3_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:444594-445880:+ | gene-YER143W_VR1 | rna-NM_001179033.3_VR1 | cds-NP_011070.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000010.1:6435-7721:+ | gene-YER143W_ZTW1 | rna-NM_001179033.3_ZTW1 | cds-NP_011070.3_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:452318-453604:+ | gene-YER143W_Sparadoxus | rna-NM_001179033.3_Sparadoxus | cds-NP_011070.3_Sparadoxus | 89.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |