Gene name: DDC1
Reference locus (S288C): YPL194W
Gene biotype: protein_coding
Description: DNA damage checkpoint protein; part of a PCNA-like complex required for DNA damage response, required for pachytene checkpoint to inhibit cell cycle in response to unrepaired recombination intermediates; potential Cdc28p substrate; forms nuclear foci upon DNA replication stress; Belongs to the DDC1 family
Top 10 interactors (score): MEC3 (0.999); RAD17 (0.999); DPB11 (0.998); MEC1 (0.993); RAD24 (0.992); RAD9 (0.945); TEL1 (0.941); RFA1 (0.937); RAD53 (0.937); MRC1 (0.933); ELG1 (0.932); RFA2 (0.911); RFC5 (0.895); CSM3 (0.894); LCD1 (0.894); RFC2 (0.894); POL32 (0.871); DNA2 (0.87); TOF1 (0.846); DUN1 (0.839)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:157124-158962:+ | gene-YPL194W_AKU4011 | rna-NM_001184008.1_AKU4011 | cds-NP_015130.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:362915-364753:+ | gene-YPL194W_BG1 | rna-NM_001184008.1_BG1 | cds-NP_015130.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:183111-184949:+ | gene-YPL194W_Bruggeman | rna-NM_001184008.1_Bruggeman | cds-NP_015130.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:179464-181302:+ | gene-YPL194W_CAT1 | rna-NM_001184008.1_CAT1 | cds-NP_015130.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:161314-163152:+ | gene-YPL194W_CBS1585 | rna-NM_001184008.1_CBS1585 | cds-NP_015130.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:176006-177844:+ | gene-YPL194W_CBS436 | rna-NM_001184008.1_CBS436 | cds-NP_015130.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:166113-167951:+ | gene-YPL194W_CBS6412 | rna-NM_001184008.1_CBS6412 | cds-NP_015130.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:157485-159323:+ | gene-YPL194W_CBS6413 | rna-NM_001184008.1_CBS6413 | cds-NP_015130.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:179224-181062:+ | gene-YPL194W_CENPK1137D | rna-NM_001184008.1_CENPK1137D | cds-NP_015130.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:156243-158081:+ | gene-YPL194W_EthanolRed | rna-NM_001184008.1_EthanolRed | cds-NP_015130.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:163614-165452:+ | gene-YPL194W_FaliES1 | rna-NM_001184008.1_FaliES1 | cds-NP_015130.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000267.1:4644-6482:+ | gene-YPL194W_JAY291 | rna-NM_001184008.1_JAY291 | cds-NP_015130.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:174498-176336:+ | gene-YPL194W_MUCL30387 | rna-NM_001184008.1_MUCL30387 | cds-NP_015130.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:172653-174491:+ | gene-YPL194W_MUCL30388 | rna-NM_001184008.1_MUCL30388 | cds-NP_015130.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:154643-156481:+ | gene-YPL194W_MUCL39482 | rna-NM_001184008.1_MUCL39482 | cds-NP_015130.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:211486-213324:+ | gene-YPL194W_MUCL42920 | rna-NM_001184008.1_MUCL42920 | cds-NP_015130.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:179260-181098:+ | gene-YPL194W_NCIM3186 | rna-NM_001184008.1_NCIM3186 | cds-NP_015130.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:161009-162847:+ | gene-YPL194W_NCYC1407 | rna-NM_001184008.1_NCYC1407 | cds-NP_015130.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:168627-170465:+ | gene-YPL194W_PE2H3 | rna-NM_001184008.1_PE2H3 | cds-NP_015130.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:168270-170108:+ | gene-YPL194W_PE2H4 | rna-NM_001184008.1_PE2H4 | cds-NP_015130.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:179277-181115:+ | gene-YPL194W_S288C | rna-NM_001184008.1_S288C | cds-NP_015130.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000012.1:192236-194074:- | gene-YPL194W_SA1 | rna-NM_001184008.1_SA1 | cds-NP_015130.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:163393-165231:+ | gene-YPL194W_ThermosaccDry | rna-NM_001184008.1_ThermosaccDry | cds-NP_015130.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:178400-180238:+ | gene-YPL194W_VR1 | rna-NM_001184008.1_VR1 | cds-NP_015130.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:162748-164586:+ | gene-YPL194W_ZTW1 | rna-NM_001184008.1_ZTW1 | cds-NP_015130.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:164304-166142:+ | gene-YPL194W_Sparadoxus | rna-NM_001184008.1_Sparadoxus | cds-NP_015130.1_Sparadoxus | 87.9 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |