Gene name: DCN1
Reference locus (S288C): YLR128W
Gene biotype: protein_coding
Description: Scaffold-type E3 ligase; required for cullin neddylation and ubiquitin ligase activation; contains a ubiquitin-binding domain (UBA) for ubiquitin and Nedd8 (Rub1p) interaction and a PONY domain involved in cullin binding and neddylation
Top 10 interactors (score): CDC53 (0.999); UBC12 (0.999); HRT1 (0.999); CUL3 (0.997); UBA3 (0.991); RRI1 (0.969); LAG2 (0.937); RUB1 (0.929); RTT101 (0.914); SKP1 (0.874); L9233.4 (0.844); CDC34 (0.828); ULA1 (0.792); RPC37 (0.761); ELC1 (0.759); TFB3 (0.721); YLR125W (0.691); SDA1 (0.66); TAO3 (0.646); HRT3 (0.626)
Homologues (species, bitscore): DCUN1D1 (Homo sapiens, 91.3); Dcun1d2 (Mus musculus, 87.4); dcun1d1 (Danio rerio, 98.2); dcun1d1 (Xenopus tropicalis, 91.7); CG7427 (Drosophila melanogaster, 87.0); dcn-1 (Caenorhabditis elegans, 69.3); AT3G12760 (Arabidopsis thaliana, 92.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:381011-381914:+ | gene-YLR128W_AKU4011 | rna-NM_001182015.1_AKU4011 | cds-NP_013229.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000212.1:344795-345698:+ | gene-YLR128W_BG1 | rna-NM_001182015.1_BG1 | cds-NP_013229.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:392890-393793:+ | gene-YLR128W_Bruggeman | rna-NM_001182015.1_Bruggeman | cds-NP_013229.1_Bruggeman | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:392305-393208:+ | gene-YLR128W_CAT1 | rna-NM_001182015.1_CAT1 | cds-NP_013229.1_CAT1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:388155-389058:+ | gene-YLR128W_CBS1585 | rna-NM_001182015.1_CBS1585 | cds-NP_013229.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:378395-379298:+ | gene-YLR128W_CBS436 | rna-NM_001182015.1_CBS436 | cds-NP_013229.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:386572-387475:+ | gene-YLR128W_CBS6412 | rna-NM_001182015.1_CBS6412 | cds-NP_013229.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:388420-389323:+ | gene-YLR128W_CBS6413 | rna-NM_001182015.1_CBS6413 | cds-NP_013229.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:383552-384455:+ | gene-YLR128W_CENPK1137D | rna-NM_001182015.1_CENPK1137D | cds-NP_013229.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:381212-382115:+ | gene-YLR128W_EthanolRed | rna-NM_001182015.1_EthanolRed | cds-NP_013229.1_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:380723-381626:+ | gene-YLR128W_FaliES1 | rna-NM_001182015.1_FaliES1 | cds-NP_013229.1_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000117.1:11563-12466:- | gene-YLR128W_JAY291 | rna-NM_001182015.1_JAY291 | cds-NP_013229.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:392881-393784:+ | gene-YLR128W_MUCL30387 | rna-NM_001182015.1_MUCL30387 | cds-NP_013229.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:397700-398603:+ | gene-YLR128W_MUCL30388 | rna-NM_001182015.1_MUCL30388 | cds-NP_013229.1_MUCL30388 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:388664-389567:+ | gene-YLR128W_MUCL39482 | rna-NM_001182015.1_MUCL39482 | cds-NP_013229.1_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:388789-389692:+ | gene-YLR128W_MUCL42920 | rna-NM_001182015.1_MUCL42920 | cds-NP_013229.1_MUCL42920 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:398504-399407:+ | gene-YLR128W_NCIM3186 | rna-NM_001182015.1_NCIM3186 | cds-NP_013229.1_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:380936-381839:+ | gene-YLR128W_NCYC1407 | rna-NM_001182015.1_NCYC1407 | cds-NP_013229.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:386505-387408:+ | gene-YLR128W_PE2H3 | rna-NM_001182015.1_PE2H3 | cds-NP_013229.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:386246-387149:+ | gene-YLR128W_PE2H4 | rna-NM_001182015.1_PE2H4 | cds-NP_013229.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:398530-399433:+ | gene-YLR128W_S288C | rna-NM_001182015.1_S288C | cds-NP_013229.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000055.1:24443-25346:+ | gene-YLR128W_SA1 | rna-NM_001182015.1_SA1 | cds-NP_013229.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:381933-382836:+ | gene-YLR128W_ThermosaccDry | rna-NM_001182015.1_ThermosaccDry | cds-NP_013229.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:394647-395550:+ | gene-YLR128W_VR1 | rna-NM_001182015.1_VR1 | cds-NP_013229.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000023.1:379730-380633:+ | gene-YLR128W_ZTW1 | rna-NM_001182015.1_ZTW1 | cds-NP_013229.1_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:389814-390719:+ | gene-YLR128W_Sparadoxus | rna-NM_001182015.1_Sparadoxus | cds-NP_013229.1_Sparadoxus | 87.7 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |