Gene name: DCD1
Reference locus (S288C): YHR144C
Gene biotype: protein_coding
Description: Deoxycytidine monophosphate (dCMP) deaminase; involved in dUMP and dTMP biosynthesis; expression is NOT cell cycle regulated
Top 10 interactors (score): CDC21 (0.997); DUT1 (0.995); CDD1 (0.992); CDC8 (0.97); URA6 (0.948); FCY1 (0.911); RFC2 (0.896); RIB2 (0.878); TAD3 (0.87); TAD2 (0.852); TAD1 (0.852); ERV1 (0.85); URA3 (0.803); PNP1 (0.752); YHR145C (0.747); SHM2 (0.734); DFR1 (0.727); YHR219W (0.717); HIS7 (0.712); URA7 (0.708)
Homologues (species, bitscore): DCTD (Homo sapiens, 66.6); Dctd (Mus musculus, 70.5); dctd (Danio rerio, 72.4); dctd (Xenopus tropicalis, 65.9); CG6951 (Drosophila melanogaster, 70.9); AT3G48540 (Arabidopsis thaliana, 78.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:374693-375631:- | gene-YHR144C_AKU4011 | rna-NM_001179275.1_AKU4011 | cds-NP_012014.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000141.1:141968-142906:+ | gene-YHR144C_BG1 | rna-NM_001179275.1_BG1 | cds-NP_012014.1_BG1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:382175-383113:- | gene-YHR144C_Bruggeman | rna-NM_001179275.1_Bruggeman | cds-NP_012014.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:377144-378082:- | gene-YHR144C_CAT1 | rna-NM_001179275.1_CAT1 | cds-NP_012014.1_CAT1 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:373715-374653:- | gene-YHR144C_CBS1585 | rna-NM_001179275.1_CBS1585 | cds-NP_012014.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:371084-372022:- | gene-YHR144C_CBS436 | rna-NM_001179275.1_CBS436 | cds-NP_012014.1_CBS436 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:375156-376094:- | gene-YHR144C_CBS6412 | rna-NM_001179275.1_CBS6412 | cds-NP_012014.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:374745-375683:- | gene-YHR144C_CBS6413 | rna-NM_001179275.1_CBS6413 | cds-NP_012014.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:380958-381896:- | gene-YHR144C_CENPK1137D | rna-NM_001179275.1_CENPK1137D | cds-NP_012014.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:433604-434542:- | gene-YHR144C_EthanolRed | rna-NM_001179275.1_EthanolRed | cds-NP_012014.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:375093-376031:- | gene-YHR144C_FaliES1 | rna-NM_001179275.1_FaliES1 | cds-NP_012014.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000440.1:5550-6488:- | gene-YHR144C_JAY291 | rna-NM_001179275.1_JAY291 | cds-NP_012014.1_JAY291 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:381929-382867:- | gene-YHR144C_MUCL30387 | rna-NM_001179275.1_MUCL30387 | cds-NP_012014.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:381926-382864:- | gene-YHR144C_MUCL30388 | rna-NM_001179275.1_MUCL30388 | cds-NP_012014.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:374059-374997:- | gene-YHR144C_MUCL39482 | rna-NM_001179275.1_MUCL39482 | cds-NP_012014.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:380304-381242:- | gene-YHR144C_MUCL42920 | rna-NM_001179275.1_MUCL42920 | cds-NP_012014.1_MUCL42920 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:387670-388608:- | gene-YHR144C_NCIM3186 | rna-NM_001179275.1_NCIM3186 | cds-NP_012014.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:376267-377205:- | gene-YHR144C_NCYC1407 | rna-NM_001179275.1_NCYC1407 | cds-NP_012014.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:375750-376688:- | gene-YHR144C_PE2H3 | rna-NM_001179275.1_PE2H3 | cds-NP_012014.1_PE2H3 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:383177-384115:- | gene-YHR144C_PE2H4 | rna-NM_001179275.1_PE2H4 | cds-NP_012014.1_PE2H4 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:387788-388726:- | gene-YHR144C_S288C | rna-NM_001179275.1_S288C | cds-NP_012014.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000103.1:662-1600:+ | gene-YHR144C_SA1 | rna-NM_001179275.1_SA1 | cds-NP_012014.1_SA1 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:376176-377114:- | gene-YHR144C_ThermosaccDry | rna-NM_001179275.1_ThermosaccDry | cds-NP_012014.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:384667-385605:- | gene-YHR144C_VR1 | rna-NM_001179275.1_VR1 | cds-NP_012014.1_VR1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:367169-368107:- | gene-YHR144C_ZTW1 | rna-NM_001179275.1_ZTW1 | cds-NP_012014.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:373639-374577:- | gene-YHR144C_Sparadoxus | rna-NM_001179275.1_Sparadoxus | cds-NP_012014.1_Sparadoxus | 89.3 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |