Gene name: DCC1
Reference locus (S288C): YCL016C
Gene biotype: protein_coding
Description: Sister chromatid cohesion protein DCC1; Subunit of a complex with Ctf8p and Ctf18p; shares some components with Replication Factor C; required for sister chromatid cohesion and telomere length maintenance; Belongs to the DCC1 family
Top 10 interactors (score): CTF18 (0.999); CTF8 (0.999); CTF4 (0.999); RFC2 (0.998); RFC3 (0.995); RFC5 (0.993); CSM3 (0.991); POL2 (0.981); RFC4 (0.963); ELG1 (0.958); CHL1 (0.958); ECO1 (0.952); TOF1 (0.949); SMC3 (0.949); CDC45 (0.947); DPB2 (0.945); BUB1 (0.935); PSF1 (0.933); MAD3 (0.933); RFA1 (0.933)
Homologues (species, bitscore): DSCC1 (Homo sapiens, 58.5); Dscc1 (Mus musculus, 56.2); dscc1 (Danio rerio, 53.9); CG11788 (Drosophila melanogaster, 59.7); AT2G44580 (Arabidopsis thaliana, 60.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:89329-90471:- | gene-YCL016C_AKU4011 | rna-NM_001178663.1_AKU4011 | cds-NP_009913.2_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000178.1:55569-56711:+ | gene-YCL016C_BG1 | rna-NM_001178663.1_BG1 | cds-NP_009913.2_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:83918-85060:- | gene-YCL016C_Bruggeman | rna-NM_001178663.1_Bruggeman | cds-NP_009913.2_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:89133-90275:- | gene-YCL016C_CAT1 | rna-NM_001178663.1_CAT1 | cds-NP_009913.2_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:89978-91120:- | gene-YCL016C_CBS1585 | rna-NM_001178663.1_CBS1585 | cds-NP_009913.2_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:94897-96039:- | gene-YCL016C_CBS436 | rna-NM_001178663.1_CBS436 | cds-NP_009913.2_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:77436-78578:- | gene-YCL016C_CBS6412 | rna-NM_001178663.1_CBS6412 | cds-NP_009913.2_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:89285-90427:- | gene-YCL016C_CBS6413 | rna-NM_001178663.1_CBS6413 | cds-NP_009913.2_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:94098-95240:- | gene-YCL016C_CENPK1137D | rna-NM_001178663.1_CENPK1137D | cds-NP_009913.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:87347-88489:- | gene-YCL016C_EthanolRed | rna-NM_001178663.1_EthanolRed | cds-NP_009913.2_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:89637-90779:- | gene-YCL016C_FaliES1 | rna-NM_001178663.1_FaliES1 | cds-NP_009913.2_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000126.1:3812-4954:- | gene-YCL016C_JAY291 | rna-NM_001178663.1_JAY291 | cds-NP_009913.2_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:82354-83496:- | gene-YCL016C_MUCL30387 | rna-NM_001178663.1_MUCL30387 | cds-NP_009913.2_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:81908-83050:- | gene-YCL016C_MUCL30388 | rna-NM_001178663.1_MUCL30388 | cds-NP_009913.2_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:90394-91536:- | gene-YCL016C_MUCL39482 | rna-NM_001178663.1_MUCL39482 | cds-NP_009913.2_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:85630-86772:- | gene-YCL016C_MUCL42920 | rna-NM_001178663.1_MUCL42920 | cds-NP_009913.2_MUCL42920 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:94253-95395:- | gene-YCL016C_NCIM3186 | rna-NM_001178663.1_NCIM3186 | cds-NP_009913.2_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:90877-92019:- | gene-YCL016C_NCYC1407 | rna-NM_001178663.1_NCYC1407 | cds-NP_009913.2_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:95049-96191:- | gene-YCL016C_PE2H3 | rna-NM_001178663.1_PE2H3 | cds-NP_009913.2_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:95006-96148:- | gene-YCL016C_PE2H4 | rna-NM_001178663.1_PE2H4 | cds-NP_009913.2_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:94621-95763:- | gene-YCL016C_S288C | rna-NM_001178663.1_S288C | cds-NP_009913.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000073.1:55578-56720:+ | gene-YCL016C_SA1 | rna-NM_001178663.1_SA1 | cds-NP_009913.2_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:90211-91353:- | gene-YCL016C_ThermosaccDry | rna-NM_001178663.1_ThermosaccDry | cds-NP_009913.2_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:100853-101995:- | gene-YCL016C_VR1 | rna-NM_001178663.1_VR1 | cds-NP_009913.2_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:89153-90295:- | gene-YCL016C_ZTW1 | rna-NM_001178663.1_ZTW1 | cds-NP_009913.2_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:119442-120584:- | gene-YCL016C_Sparadoxus | rna-NM_001178663.1_Sparadoxus | cds-NP_009913.2_Sparadoxus | 90.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |