Gene name: DAN4
Reference locus (S288C): YJR151C
Gene biotype: protein_coding
Description: Cell wall mannoprotein; has similarity to Tir1p, Tir2p, Tir3p, and Tir4p; expressed under anaerobic conditions, completely repressed during aerobic growth; Belongs to the SRP1/TIP1 family
Top 10 interactors (score): YBR012W-B (0.771); CWP2 (0.747); YLR410W-B (0.692); YGR126W (0.612); MNT4 (0.572); YOR062C (0.571); ERG25 (0.57); FLO1 (0.569); MPD1 (0.569); CWP1 (0.565); YHR210C (0.561); YJR120W (0.527); THO1 (0.526); ECM23 (0.526); AUS1 (0.523); TIR4 (0.517); HSP150 (0.499); SED1 (0.497); FLO9 (0.489); SPG3 (0.485)
Homologues (species, bitscore): MAGEE1 (Homo sapiens, 59.7); Zscan18 (Mus musculus, 64.7); SPTBN5 (Danio rerio, 61.6); hhipl2 (Xenopus tropicalis, 55.8); shot (Drosophila melanogaster, 92.8); T01D3.1 (Caenorhabditis elegans, 58.5); AT4G05612 (Arabidopsis thaliana, 51.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:683755-687651:- | gene-YJR151C_AKU4011 | rna-NM_001181809.2_AKU4011 | cds-NP_012685.1_AKU4011 | 84.0 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000187.1:7160-10504:+ | gene-YJR151C_BG1 | rna-NM_001181809.2_BG1 | cds-NP_012685.1_BG1 | 84.2 | 90.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:700570-704361:- | gene-YJR151C_Bruggeman | rna-NM_001181809.2_Bruggeman | cds-NP_012685.1_Bruggeman | 84.3 | 98.6 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:704190-707645:- | gene-YJR151C_CAT1 | rna-NM_001181809.2_CAT1 | cds-NP_012685.1_CAT1 | 93.9 | 97.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:698259-698860:- | gene-YJR151C_CBS1585 | rna-NM_001181809.2_CBS1585 | cds-NP_012685.1_CBS1585 | 16.9 | 17.1 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:714669-718090:- | gene-YJR151C_CBS436 | rna-NM_001181809.2_CBS436 | cds-NP_012685.1_CBS436 | 92.3 | 98.1 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:684531-685003:- | gene-YJR151C_CBS6412 | rna-NM_001181809.2_CBS6412 | cds-NP_012685.1_CBS6412 | 13.2 | 13.4 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:687373-688094:- | gene-YJR151C_CBS6413 | rna-NM_001181809.2_CBS6413 | cds-NP_012685.1_CBS6413 | 18.3 | 20.4 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:694629-698108:- | gene-YJR151C_CENPK1137D | rna-NM_001181809.2_CENPK1137D | cds-NP_012685.1_CENPK1137D | 75.0 | 99.5 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:689493-690845:- | gene-YJR151C_EthanolRed | rna-NM_001181809.2_EthanolRed | cds-NP_012685.1_EthanolRed | 34.1 | 36.6 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:699790-703586:- | gene-YJR151C_FaliES1 | rna-NM_001181809.2_FaliES1 | cds-NP_012685.1_FaliES1 | 84.7 | 98.2 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000095.1:9517-12306:- | gene-YJR151C_JAY291 | rna-NM_001181809.2_JAY291 | cds-NP_012685.1_JAY291 | 77.3 | 79.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:700528-704484:- | gene-YJR151C_MUCL30387 | rna-NM_001181809.2_MUCL30387 | cds-NP_012685.1_MUCL30387 | 80.7 | 97.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:697749-701581:- | gene-YJR151C_MUCL30388 | rna-NM_001181809.2_MUCL30388 | cds-NP_012685.1_MUCL30388 | 74.1 | 90.6 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:21304-21905:- | gene-YJR151C_MUCL39482 | rna-NM_001181809.2_MUCL39482 | cds-NP_012685.1_MUCL39482 | 16.9 | 17.1 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:694006-697310:- | gene-YJR151C_MUCL42920 | rna-NM_001181809.2_MUCL42920 | cds-NP_012685.1_MUCL42920 | 70.9 | 84.4 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:712234-715719:- | gene-YJR151C_NCIM3186 | rna-NM_001181809.2_NCIM3186 | cds-NP_012685.1_NCIM3186 | 97.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:689541-690262:- | gene-YJR151C_NCYC1407 | rna-NM_001181809.2_NCYC1407 | cds-NP_012685.1_NCYC1407 | 18.3 | 20.4 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:705011-708658:- | gene-YJR151C_PE2H3 | rna-NM_001181809.2_PE2H3 | cds-NP_012685.1_PE2H3 | 93.2 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:698700-702347:- | gene-YJR151C_PE2H4 | rna-NM_001181809.2_PE2H4 | cds-NP_012685.1_PE2H4 | 93.2 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:712255-715740:- | gene-YJR151C_S288C | rna-NM_001181809.2_S288C | cds-NP_012685.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000108.1:13134-16229:+ | gene-YJR151C_SA1 | rna-NM_001181809.2_SA1 | cds-NP_012685.1_SA1 | 81.7 | 85.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:693817-697579:- | gene-YJR151C_ThermosaccDry | rna-NM_001181809.2_ThermosaccDry | cds-NP_012685.1_ThermosaccDry | 85.3 | 98.6 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:695938-699407:- | gene-YJR151C_VR1 | rna-NM_001181809.2_VR1 | cds-NP_012685.1_VR1 | 64.0 | 92.4 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:672914-676310:- | gene-YJR151C_ZTW1 | rna-NM_001181809.2_ZTW1 | cds-NP_012685.1_ZTW1 | 82.6 | 90.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:707306-710716:- | gene-YJR151C_Sparadoxus | rna-NM_001181809.2_Sparadoxus | cds-NP_012685.1_Sparadoxus | 66.5 | 91.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |