DAM1 (YGR113W)


Gene profile

Gene name: DAM1
Reference locus (S288C): YGR113W
Gene biotype: protein_coding

Description: Essential subunit of the Dam1 complex (aka DASH complex); cooperates with Duo1p to connect the DASH complex with the microtubules (MT); couples kinetochores to the force produced by MT depolymerization thereby aiding in chromosome segregation; Ipl1p target for regulating kinetochore-MT attachments

Top 10 interactors (score): DAD1 (0.999); DUO1 (0.999); SPC34 (0.999); SPC19 (0.999); ASK1 (0.997); DAD4 (0.994); DAD2 (0.992); IPL1 (0.985); HSK3 (0.982); DAD3 (0.981); NDC80 (0.978); IML3 (0.974); CHL4 (0.968); MPS1 (0.941); CTF19 (0.936); STU2 (0.913); SLI15 (0.898); CBF2 (0.852); CIN8 (0.843); BIK1 (0.841)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005301.1:698226-699257:+ gene-YGR113W_AKU4011 rna-NM_001181242.3_AKU4011 cds-NP_011628.4_AKU4011 98.4 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000188.1:6674-7705:+ gene-YGR113W_BG1 rna-NM_001181242.3_BG1 cds-NP_011628.4_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005509.1:699890-700921:+ gene-YGR113W_Bruggeman rna-NM_001181242.3_Bruggeman cds-NP_011628.4_Bruggeman 98.6 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005525.1:698093-699124:+ gene-YGR113W_CAT1 rna-NM_001181242.3_CAT1 cds-NP_011628.4_CAT1 99.9 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005365.1:699216-700247:+ gene-YGR113W_CBS1585 rna-NM_001181242.3_CBS1585 cds-NP_011628.4_CBS1585 98.4 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005349.1:700825-701856:+ gene-YGR113W_CBS436 rna-NM_001181242.3_CBS436 cds-NP_011628.4_CBS436 99.9 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005333.1:690885-691916:+ gene-YGR113W_CBS6412 rna-NM_001181242.3_CBS6412 cds-NP_011628.4_CBS6412 98.4 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005317.1:695819-696850:+ gene-YGR113W_CBS6413 rna-NM_001181242.3_CBS6413 cds-NP_011628.4_CBS6413 98.4 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001528.1:718611-719642:+ gene-YGR113W_CENPK1137D rna-NM_001181242.3_CENPK1137D cds-NP_011628.4_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005477.1:685309-686340:+ gene-YGR113W_EthanolRed rna-NM_001181242.3_EthanolRed cds-NP_011628.4_EthanolRed 98.4 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005541.1:689118-690149:+ gene-YGR113W_FaliES1 rna-NM_001181242.3_FaliES1 cds-NP_011628.4_FaliES1 98.6 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000092.1:7508-8539:- gene-YGR113W_JAY291 rna-NM_001181242.3_JAY291 cds-NP_011628.4_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005413.1:698616-699647:+ gene-YGR113W_MUCL30387 rna-NM_001181242.3_MUCL30387 cds-NP_011628.4_MUCL30387 98.8 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005445.1:699702-700733:+ gene-YGR113W_MUCL30388 rna-NM_001181242.3_MUCL30388 cds-NP_011628.4_MUCL30388 98.6 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005285.1:694943-695974:+ gene-YGR113W_MUCL39482 rna-NM_001181242.3_MUCL39482 cds-NP_011628.4_MUCL39482 98.4 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005429.1:704712-705743:+ gene-YGR113W_MUCL42920 rna-NM_001181242.3_MUCL42920 cds-NP_011628.4_MUCL42920 98.6 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011816.1:718893-719924:+ gene-YGR113W_NCIM3186 rna-NM_001181242.3_NCIM3186 cds-NP_011628.4_NCIM3186 98.5 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005269.1:689636-690667:+ gene-YGR113W_NCYC1407 rna-NM_001181242.3_NCYC1407 cds-NP_011628.4_NCYC1407 98.4 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994146.1:703188-704219:+ gene-YGR113W_PE2H3 rna-NM_001181242.3_PE2H3 cds-NP_011628.4_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999878.1:708306-709337:+ gene-YGR113W_PE2H4 rna-NM_001181242.3_PE2H4 cds-NP_011628.4_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001139.9:718893-719924:+ gene-YGR113W_S288C rna-NM_001181242.3_S288C cds-NP_011628.4_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000015.1:140209-141240:+ gene-YGR113W_SA1 rna-NM_001181242.3_SA1 cds-NP_011628.4_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005493.1:709498-710529:+ gene-YGR113W_ThermosaccDry rna-NM_001181242.3_ThermosaccDry cds-NP_011628.4_ThermosaccDry 98.5 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005461.1:811906-812937:+ gene-YGR113W_VR1 rna-NM_001181242.3_VR1 cds-NP_011628.4_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000016.1:11892-12923:+ gene-YGR113W_ZTW1 rna-NM_001181242.3_ZTW1 cds-NP_011628.4_ZTW1 98.2 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047493.1:699326-700357:+ gene-YGR113W_Sparadoxus rna-NM_001181242.3_Sparadoxus cds-NP_011628.4_Sparadoxus 88.5 100.0 Verified 1 1 1 False True False False False

Additional files